Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0060 ATGGTGCTGACTCAGAAGCTTCACGAAGCTTTCAAAGGCACCGTCGAGAGAATCACAGGTCCCCGCACCGTCTCCGCCTTCAAAGAGAAAGGAGTTCTCAGTGTCTCCGAGTTCGTCATCGCCGGCGATAATCTCGTCGCCAAGTGCCCCACCTGGTCATGGGAATCGGGTGAACCGAGCAAGAGGAAGTCATATTTACCATCTGACAAACAATTCTTAATCACAAGAAACGTGCCTTGTCTACGGAGAGCTGCATGTATTGAAGCAGAATATGAAGCTGCTGGAGGGGAAGTTCTACTTGATGATGAAGAGCATGATGGGTGGCTAGCAACCCATGGGAAACCCAAAGAAGGAAAATCTGATGAGGGTGACAATTTACCTTCTATGGAAAGCCTAGAAATCAGCAAAAAGAGTCCCATTAAGCAAATTCATTCCTACATGGGAGGTGACGAAGATGATGATATTCCAGATATGGCAGAGTTTGAAGAAACTGACAACGTTATTGAGACAGATGCTGCCACTCTTCAGTCCACATATCTAGTTGCTCATGAACCTGATGATGACAATATCCTACTAACCCGCACATATGACATCAGCATCACGTATGATAAATATTATCAAACACCTCGGGTGTGGCTTACTGGATATGATGAGTCAAGAATGCTGTTGCAACCAGAACTTGCCCTTGACGATGTTAGTCAAGATCATGCACACAAAACGGTAACAATTGAAGACCACCCTCACTTGCCTGGGAAGCATGCATCTATTCATCCATGTCAACACGGAGCAGTGATGAAGAAAATCATTGATGTGTTGATGTCACGTGGTGTTGAGCCTGAAGTTGACAAGTACCTATTTTTATTCTTGAAGTTTATGGCCTCTGTAATTCCAACAATTGAGTATGATTACACTATGGACTTTGACCTTGGTAGCTCCAGCAATTGA 945 0.4444 MVLTQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVAKCPTWSWESGEPSKRKSYLPSDKQFLITRNVPCLRRAACIEAEYEAAGGEVLLDDEEHDGWLATHGKPKEGKSDEGDNLPSMESLEISKKSPIKQIHSYMGGDEDDDIPDMAEFEETDNVIETDAATLQSTYLVAHEPDDDNILLTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELALDDVSQDHAHKTVTIEDHPHLPGKHASIHPCQHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0060 314 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 309 - -
Lja3g0060 314 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 309 IPR007135 GO:0019787
Lja3g0060 314 Pfam Autophagocytosis associated protein, active-site domain 37 303 IPR007135 GO:0019787
Lja3g0060 314 Gene3D - 154 299 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0060 K08343 - gmx:100814257 579.326