Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0045 ATGTGGAAACGCGCAACCGCTTCCGTGAAGTCATCCCTACTCTCCTCCCTTCACAATCACATTCAGGAACCCAGCGCTACTCATTGCCATAGATTTACCTCCGGATTCCCTATGCAGGAAAAGACTGGGATCTTCCCCCAACATATAGCTCCGATCATAACTTTTGTTTTAGGGGGGCCTGGTAGTGGTAAAGGTACGCAATGCGAAAAAATTGTTGAAACTTTTGGATTTAAGCATCTCAGTGCTGGAGATCTTTTGAGAAAGGAGGTGCTTTCTGATACTGAATACGGCTCCATGATTCTCAGTACAATTAGTGAAGGAAGAATTGTTCCATCACAAGTGACAGTCAAATTGATTCTAAGAGAGATGGAATCGAGTGACAATCATAAGTTTCTTATTGATGGTTTCCCTCGAAGCGAGGAGAACCGCATAGCTTTCGAAAAAATTATTGGATCAGAGCCGGATATAGTACTTTTCTTTGATTGTCCTGAAGAAGAGATGGTGAAACGGGTGCTGAGCCGTAATCAGGGTCGAATTGATGACAATATAGATACAATGAAGAAACGTCTAAAAATATTTGAGGCTTTAAATCTTCCTGTGGTTGATTATTATGCAAAAAAAGGGAAACTTCGCAGGATCAAAGCAGTGGGAACAGTCGATGAAATATTTGAGCAAGTTCGGCCAGTTTTTGAGGCACTAGCTCAACCCCAAGTGAAAGCTGTTTGA 726 0.4201 MWKRATASVKSSLLSSLHNHIQEPSATHCHRFTSGFPMQEKTGIFPQHIAPIITFVLGGPGSGKGTQCEKIVETFGFKHLSAGDLLRKEVLSDTEYGSMILSTISEGRIVPSQVTVKLILREMESSDNHKFLIDGFPRSEENRIAFEKIIGSEPDIVLFFDCPEEEMVKRVLSRNQGRIDDNIDTMKKRLKIFEALNLPVVDYYAKKGKLRRIKAVGTVDEIFEQVRPVFEALAQPQVKAV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0045 241 Hamap UMP-CMP kinase [CMPK1]. 51 233 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Lja3g0045 241 Hamap Adenylate kinase [adk]. 52 231 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 Pfam Adenylate kinase 56 208 - -
Lja3g0045 241 ProSitePatterns Adenylate kinase signature. 131 142 IPR033690 -
Lja3g0045 241 PANTHER NUCLEOTIDE KINASE 52 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 PRINTS Adenylate kinase signature 195 209 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 PRINTS Adenylate kinase signature 178 193 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 PRINTS Adenylate kinase signature 83 97 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 PRINTS Adenylate kinase signature 55 68 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 PRINTS Adenylate kinase signature 131 147 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 233 IPR027417 -
Lja3g0045 241 PANTHER UMP-CMP KINASE 52 235 - -
Lja3g0045 241 CDD ADK 55 222 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0045 241 Gene3D - 48 233 IPR027417 -
Lja3g0045 241 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 53 230 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0045 Lja-Chr3 518570 526806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0045 K13800 - gmx:100777369 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0045 3 518570 526806 Lja3g0045 3 518570 526806 ECH