Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0043 ATGGTTCTTCTACAGCCAGATCCGTTTCTCAATGAGCTCACCAGCATGTTTGAGTGCACCACTGAGAAGGGCTCTGTTTGGTCTTCCTGGAAACTTATTATTTTCTTGTTGTTAGCATCCCTGAAATCTAAAGTGCAGAGGAATAAATTGGCGACGGCTGGTGAAGCAATTGAGTACAGATGCCTCATCCGTGCCACTGATGGGAAAAAGACTATTTCTACCTCAGTTGGACCAAAGGATCATCAGCGCTTTCAAGCTTCTTATGCAACTATATTAAAAGCCCACATGACTGCTCTAAAAAAGAGAGAAAGGAAGGACAAGAAGAAATCTGCTGAGGCTGATAAAAGAGAAGGGAGTTCAAAAAGGCCAAAGAAAGTCTTAAAAGTATGA 390 0.4205 MVLLQPDPFLNELTSMFECTTEKGSVWSSWKLIIFLLLASLKSKVQRNKLATAGEAIEYRCLIRATDGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKSAEADKREGSSKRPKKVLKV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0043 129 PANTHER - 2 125 - -
Lja3g0043 129 MobiDBLite consensus disorder prediction 99 129 - -
Lja3g0043 129 PANTHER SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN 2 125 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Lja3g0043 129 Pfam Signal recognition particle 14kD protein 4 99 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Lja3g0043 129 SUPERFAMILY Signal recognition particle alu RNA binding heterodimer, SRP9/14 1 102 IPR009018 GO:0006614|GO:0008312|GO:0048500
Lja3g0043 129 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9/1 1 128 IPR009018 GO:0006614|GO:0008312|GO:0048500
Lja3g0043 129 MobiDBLite consensus disorder prediction 105 121 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0043 K03104 - gmx:100526909 190.274