Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0040 ATGGTTTACGGGGTGAGAGAAATTAACGTGAGCCGCAGCGGCAGCGGCAGCGGAGGAGAGCCTGTGAATTTGATTGATACTGAAAATGGTGAATCGTTGATGCGTGTGCAACCCGGTGTCGACTTAGTCCTTTCCAATCTTCCTCCACACTCCCCCGGCAGCGGCACTCTCTATGTCACTACCAAGCAAGTCATCTGGGTCAGTGATCTCGACCAAACTAAAGGATTTGCGGTTGATTTTCTCTCTATTTCACTCCATGCTGTCTCCAGAGACCCTGATGCCTACCCTCTTCCATGTCTATATACCCAGATTGAAACTGAAGACGATCTTCATTCCAACGACTCTGATTCTGAATCAAATAATCATGCCTTGGATTTATCCACGGTCAGAGAGATGAGGCTCATTCCATCTGATCCCACTCAATTGGATTCTCTGTTTCAAACATTCTGCGACTGTGCTGAGCTTAATCCTGAACCTAATGCTGCTGCTGCTGCTGCTGCTGCTGCTGAGGAGGAAGGTCAACAACATAATTGGATCTTCAGCGCTGATCAGATGGAAGATGATGAACAACCTGAGGAGGAAGGCTATATTGCTCCCAACCTTGCCAACTCTCTTGGTCATTCAAATGGAGATCATGACCTTGCTCGTACTGTGCTTGAGCTTCAAATCAATGATCAACGATTTGAGGATGCAGAGGAGGTTGAGCATGATGGAGATGGTACCCATCATTGA 732 0.4727 MVYGVREINVSRSGSGSGGEPVNLIDTENGESLMRVQPGVDLVLSNLPPHSPGSGTLYVTTKQVIWVSDLDQTKGFAVDFLSISLHAVSRDPDAYPLPCLYTQIETEDDLHSNDSDSESNNHALDLSTVREMRLIPSDPTQLDSLFQTFCDCAELNPEPNAAAAAAAAAEEEGQQHNWIFSADQMEDDEQPEEEGYIAPNLANSLGHSNGDHDLARTVLELQINDQRFEDAEEVEHDGDGTHH* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0040 243 PANTHER CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN 2 242 IPR039924 -
Lja3g0040 243 Pfam Regulator of volume decrease after cellular swelling 55 177 IPR039924 -
Lja3g0040 243 Gene3D - 25 163 IPR011993 -
Lja3g0040 243 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 127 139 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Lja3g0040 243 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 75 89 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Lja3g0040 243 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 52 67 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Lja3g0040 243 PANTHER BNAA02G33340D PROTEIN 2 242 - -
Lja3g0040 243 SUPERFAMILY PH domain-like 27 83 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0040 K05019 - gmx:100790816 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0040 3 456597 458713 Lja3g0040 3 456597 458713 ECH