Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0037 ATGGAGAGAAATGAAGATGTGGAGATTGTGATCGTGGGAGGTGGTATATGTGGCCTTGCAACAGCCCTCGCCCTTCACAGGAAGAGCATTAAAAGTTTGGTGTTAGAAAGATCAGACAAGTTGCGAGCTACAGGAGCAGCCATTATTGTGCAGGCAAATGGGTGGCGTGCTCTTGATCAGCTAGGTGTTGGTTCAATTCTTAGACAAACGGCCATTCCAATTAAAGGGGTTCCTCACGAATTTCGTTGTTTGAAGCGTACTGATCTGATGGAAGCCATGGCCAATAGTTTACCGGAGGGAACTATACGTACCAGTTGTCAAGTACTTTCCGTTGAATTGGATCCAGTAACACATGATCAAAAACTTTTGCTAAGCAATGGAACCATCCTTCATGCCAATGTTGTTATTGGATGTGATGGCGTGAATACTTGCATTGCAAACATGGTTGGATTACAACGGTCTAATTTCTTGCCCTTCTTGACATGCGTGGCGCGAGGCTTCACAAATTATCCAAATGGTCATCAATTTGGTAGTGAGTTTGTTATGATGGTCAGAGGTCATGTCCAACTTGGAACAATCCCAGTGACGGAAAAGCTTGTTTACTGGTTTTTAACAAGGCCAAAAACTTCTCAAGATTCAATAATTTCAAATAACACAAGTCTTATTAGACAATCTTTGATGGAATCAATGAAGGGTTTCCCAACACACGCAATGGATATGATACAAAATTGCATGTTGAACTTCTTGCATCTCACTGACTTGAAGTATCGTCCACCATGGGACTTGATTCTTAGCCACTTCCGGAAAGGCACAATAACCATTGCTGGCGATGCACTGCATGCTACAGGCCCATTCATTGCACAAGGTGGCTCAGCTTCCATAGAAGATGCAATTGTTCTTGCTAGATGCTTGGCCCAAAAGATGCATAGTGCTAAGAACAACGCGATAAGAAAGAGAGATGTAGAGGAAGCATTTCATCAATATGCTAAAGAAAGGAAGATGAGAATCTTTTGGATCTCTTTGCATAGTTTTCTTATTGGGAAAAAGCTTGATGCACAATCATTCATAATGAAATCGATTATCATTGCACTCATGGTGATTCTGTTTAGAGACCCAGATTGGCATACCCGCTATGATTGTGGGACTCTATAG 1152 0.4193 MERNEDVEIVIVGGGICGLATALALHRKSIKSLVLERSDKLRATGAAIIVQANGWRALDQLGVGSILRQTAIPIKGVPHEFRCLKRTDLMEAMANSLPEGTIRTSCQVLSVELDPVTHDQKLLLSNGTILHANVVIGCDGVNTCIANMVGLQRSNFLPFLTCVARGFTNYPNGHQFGSEFVMMVRGHVQLGTIPVTEKLVYWFLTRPKTSQDSIISNNTSLIRQSLMESMKGFPTHAMDMIQNCMLNFLHLTDLKYRPPWDLILSHFRKGTITIAGDALHATGPFIAQGGSASIEDAIVLARCLAQKMHSAKNNAIRKRDVEEAFHQYAKERKMRIFWISLHSFLIGKKLDAQSFIMKSIIIALMVILFRDPDWHTRYDCGTL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0037 383 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 - -
Lja3g0037 383 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 - -
Lja3g0037 383 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Lja3g0037 383 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 383 IPR044560 -
Lja3g0037 383 Pfam FAD binding domain 6 314 IPR002938 GO:0071949
Lja3g0037 383 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 383 - -
Lja3g0037 383 Gene3D - 8 359 IPR036188 -
Lja3g0037 383 SUPERFAMILY FAD/NAD(P)-binding domain 7 359 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0037 Lja-Chr3 443277 445174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0037 1 383 Miscellaneous Gene Families AT5G05320 33.571 1.45e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0037 - - gmx:100805243 558.525