Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0034 ATGATCTCCTTGTGGCCAAGGGAACTTGGTGACGGCAACAAGATCAGAAACATGAGGGGAAAACCAGCTTCAGGAAAAACCATTTTGATTCTGTGCACTGCATGCTTTCTTGCCGGAACACTCTTCACAGGGCAAATGTGGACACGCCCCTCCAACCATGAAAATGCAGTGGTGTCAGTAAGACATGATTGTGACCATAAGCGAAAATTGACTGAAGGAAGACCTGGTGATGTAATGGAGGAAGTCACAAAGACCCATCAAGCTATCAAGTCTCTGGATAAGGCAGTTTCAACATTGGAAATGGAACTGACAGCAGCTAGGACAGGCCAAACTGGTGGGCAGCACTTGCGCCAGCATGCTCCTAACCACAGTTTAAAGAAAGCTTTTGTGGTGATTGGCATCAACACAGCCTTCAGCAGCAAAAGCAGAAGAGACTCCATCCGTGAAACATGGTTACCTAAAGGAAATCAACTGAAGGAACTAGAGAAAGAGAAGGGCATTGTTGTAAGGTTCATGATCGGACATAGCACCACGCCAGGCAGCATTCTTGATAAGGCAATTGATGCAGAAGAGGCAGAACACAAAGACTTCCTGAGGTTAGACCATGTTGAGGGCTACCATGAGCTATCTGCCAAGACACGCCTCTATTTCTCCACAGTTATTTCTATGTGGGATGCTGAGTTCTATGTTAAGGTTGACGATGACATCCATCTAAATCTAGGTGTGCTAGTGAGTACACTTGCCAAGTACCGATCAAGACCCAGGGTTTATATTGGTTGCATGAAATCTGGTCCAGTTCTATATCAAAAAGGAGTGAAATATCATGAGGCTGAGCACTGGAAGTTTGGAGAAGAAGGGAACAAGTATTTCAGGCATGCCACTGGACAACTATATGCCATCTCCAAGGATCTTGCTACCTATATATCCATCAATTGGCCCATACTACACAAATATGCAAATGAAGATGTGTCTTTGGGGTCATGGTTATTGGGCCTAGAAGTTGAACATGTAGATGAACGCTCTATGTGTTGCGGAACACCTCCAGATTGTGATTGGAAGGCAAGGTCAGGAAATATGTGTGCGGCTTCTTTTGATTGGTCATGCAGTGGTATCTGTAAATCCGTGGAAAGAATGAAGGACATTCACAAAGCTTGTGGGGAGGGAGATGGAGCTGTTTGGAATGTTGAACTCTAA 1194 0.4489 MISLWPRELGDGNKIRNMRGKPASGKTILILCTACFLAGTLFTGQMWTRPSNHENAVVSVRHDCDHKRKLTEGRPGDVMEEVTKTHQAIKSLDKAVSTLEMELTAARTGQTGGQHLRQHAPNHSLKKAFVVIGINTAFSSKSRRDSIRETWLPKGNQLKELEKEKGIVVRFMIGHSTTPGSILDKAIDAEEAEHKDFLRLDHVEGYHELSAKTRLYFSTVISMWDAEFYVKVDDDIHLNLGVLVSTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEHWKFGEEGNKYFRHATGQLYAISKDLATYISINWPILHKYANEDVSLGSWLLGLEVEHVDERSMCCGTPPDCDWKARSGNMCAASFDWSCSGICKSVERMKDIHKACGEGDGAVWNVEL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0034 397 Pfam Galactosyltransferase 142 338 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja3g0034 397 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 22 388 - -
Lja3g0034 397 Pfam Domain of unknown function (DUF4094) 24 108 IPR025298 -
Lja3g0034 397 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 22 388 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja3g0034 397 Gene3D - 118 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0034 Lja-Chr3 410346 415225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0034 24 397 Glycosyltransferase AT1G77810 62.240 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0034 K20855 - gmx:100776291 704.516