Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0027 ATGAATTTGAATACGGCATCATATTCATGGAGCGGGTTGGGGATTTGCAATCCAATTGAGTGTAAGGCGCGTGGTGGATCTTCACTTCCAGTTAATCGCCGGCGCCGGCAACATCCCTTGCCTTCTTGTTCTGTTGCTTTCGGTGTCCGTTTGTGCTGCGATGCCTCTATCCGCTCTCATTCCCAATCTACGCCTGTCAAAGCAGCGGCGGCGGCGGAGAAGGAGGCTCTCCGTGTCATGATTTCAGGTGCTCCGGCTTCTGGTAAAGGAACTCAATGTGAGCTCATCACTAACAAATATGGTTTGGTTCACGTTGCTGCCGGAGATTTGCTCAGGGCAGAAATTGCCACCGGAAGTCAAAACGGACAGCGTGCAAAAGACTACATGGAGAAGGGACAGTTGGTCCCTGATGAAATTGTTGTCATGATGGTGAAGGAACGTCTCTTGAAGCCAGACTCTATACACAAGGGTTGGCTTTTGGATGGTTATCCCAGGAGCTTATCACAAGCTACTGCACTTAAGCAATTTGGCTTTCAACCTGATATTTTCATTCTTCTAGAGGTTTCTGAAGATATTCTTGTCGAGAGAGTAGTTGGGCGCAGATTAGATCCTGTTACTGGTAAGATATATCATTTGAAGTATTCTCCTCCAGAGACAAAAGAAATTGCAGAGAGGCTAACCCAACGTTTTGATGATACTGAAGAAAAGGTAAAGTTGCGATTGAACACCCATCATCAAAATGTGGAGGCAGTGCTTTCCATTTATAAAGACATAACGGTTAAGATTGATGGAAATGCCTCCAAGGAGGAAGTATTTGTTCAAATTGATGGTGCACTCACACGTCTTTTAGAGCAAAGGAAAGCTGCTTCAGGATCAGTGGCAGCATAG 888 0.4572 MNLNTASYSWSGLGICNPIECKARGGSSLPVNRRRRQHPLPSCSVAFGVRLCCDASIRSHSQSTPVKAAAAAEKEALRVMISGAPASGKGTQCELITNKYGLVHVAAGDLLRAEIATGSQNGQRAKDYMEKGQLVPDEIVVMMVKERLLKPDSIHKGWLLDGYPRSLSQATALKQFGFQPDIFILLEVSEDILVERVVGRRLDPVTGKIYHLKYSPPETKEIAERLTQRFDDTEEKVKLRLNTHHQNVEAVLSIYKDITVKIDGNASKEEVFVQIDGALTRLLEQRKAASGSVAA* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0027 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 282 IPR027417 -
Lja3g0027 295 CDD ADK 78 271 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0027 295 ProSitePatterns Adenylate kinase signature. 158 169 IPR033690 -
Lja3g0027 295 PANTHER ADENYLATE KINASE 8 35 286 - -
Lja3g0027 295 TIGRFAM adk: adenylate kinase 78 278 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lja3g0027 295 Hamap Adenylate kinase [adk]. 77 280 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0027 295 Pfam Adenylate kinase 81 257 - -
Lja3g0027 295 PANTHER NUCLEOTIDE KINASE 35 286 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0027 295 Gene3D - 73 292 IPR027417 -
Lja3g0027 295 PRINTS Adenylate kinase signature 158 174 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0027 295 PRINTS Adenylate kinase signature 108 122 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0027 295 PRINTS Adenylate kinase signature 229 244 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g0027 295 PRINTS Adenylate kinase signature 80 93 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0027 Lja-Chr3 367916 371162 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0027 K00939 - gmx:100784319 391.734