Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0018 ATGAATGATTGTGGTGGAAGTGCGATGGCGGAATTGGAAGATGAGGAGGAGAGGGTATCACTGACACTAGATTCACAAGTAGGTGTGGTTGTTGATGGAGCCGTTGACTACAAAGGTCAACCCTCCATCAGATCCAAATCTGGGTCATGGAAATCTGCTCGCTTTATCATCGGCGTGGAAGTGGCTGAGAGGATGGCATATTACGGGATTCAGGCGAATCTCATATCGTATCTCACAGGTCCACTCCACCAGAATACCGCCACCGCTGCTGAGAATGTCAATATCTGGTCAGGAACCGCTTCTTTGCTTCCTCTCTTTGGTGCCTTCCTTGCTGATTCTCTTCTCGGACGCTACCGCACCATCATCCTCGCTTCCCTCATCTATATTTTGGGTCTAGGCTTGTTAACATTATCAGCTTTGCTTCCTTCCCTCACCAAATATGAGTGCCAACTTGACAGCAAATTCACATCATGCTCTCCTCAGTTGCAAGTCATCTTGTTCTTTATCTCACTTTATCTGGTCGCCATTGGACAAGGTGGACATAAGCCCTGTGTTCAGGCTTTTGGGGCTGACCAATTTGATGAACGTCATCCAAAGGAGCACAAAGCTAGAAGCACATTCTTCAATTGGTGGTATTTTACCATGTGTGCAGGTTGTATGGCAACATTGTGGATCTTGAACTACATACAGGACAACCTTAGTTGGGTTATTGGATTTGGAATACCTTGTGTTGCAATGATTATTGCATTGCTTGTTTTCTTGCTTGGAACAACCACCTACAGGTTTAACATTCAGGAGTGTGACAAGATCAGTCCCTTTCTCAGAATTGGCCGTGTATTTCTTGCAGCTATAAGAAATCGGCAAACTACCATATCAAGCATGTCTATAGAAGAGGAATCTCGTGGAATACTTCCTCATCAAAATTCTGAACAATTCAATTTCCTCAACAAGGCATTGTTAGCACCAAAGGGTTCTAAGGAAGAGGAGACTTGTAGCCTTACTGAGGTGGAAGAAGCAAAGGCAGTACTGAGGCTGGTTCCAATTTGGGCTACAACTCTAGTTTATGGTATCATCTTTGCTCAAATTTTTACTTTTTTTACCAAACAAGGAGCAACTATGGAGAGAACAATATTTCCTGGTTTTGATATACCTGCTGCTTCTCTTCAAACGCTTGGCACCCTGGCCATTGTTATCTTCAGTCCCATATATGACAGGCTTTTTGTACCAATGGCAAGAGCTATCACTGGGAAACACTCCGGCATCACAATGCTGCAAAGAATAGGGACTGGAATTTTTATATCCATAGTTACAATTGTACTTGCAGCTCTTGTTGAGATGAAAAGGTTAAAGACAGCACAAGAGTCAGGTCTTGTTGATGATCCTGGTGCAACAGTTCCAATGAGTATATGGTGGTTGATTCCTCAGTATTTCTTGTTTGGAGTTTCTGAAGTTTTTACCATGGTTGGTCTGCAGGAATTTTTCTATGATCAAGTCCCAAATGAACTAAGAAGCATGGGTCTTGCTCTCTACCTTAGTATCTTTGGTGTAGGGAGCTTTCTGAGCGGCTTCCTCATTTCTGTGATAGAAACGGTGACAGGAAAAGATGGCCAAGACAGTTGGTTTGCTAATAATCTCAATAAGGCGCATATTGATTACTTTTACTGGCTACTTGCTGGATTCAGTGTGGTGGGATTTGCAATGTTCATGTGCTTTGCAAAATCTTATGTATATAATCACAAAGGAGCATCACGAGTATAG 1758 0.4283 MNDCGGSAMAELEDEEERVSLTLDSQVGVVVDGAVDYKGQPSIRSKSGSWKSARFIIGVEVAERMAYYGIQANLISYLTGPLHQNTATAAENVNIWSGTASLLPLFGAFLADSLLGRYRTIILASLIYILGLGLLTLSALLPSLTKYECQLDSKFTSCSPQLQVILFFISLYLVAIGQGGHKPCVQAFGADQFDERHPKEHKARSTFFNWWYFTMCAGCMATLWILNYIQDNLSWVIGFGIPCVAMIIALLVFLLGTTTYRFNIQECDKISPFLRIGRVFLAAIRNRQTTISSMSIEEESRGILPHQNSEQFNFLNKALLAPKGSKEEETCSLTEVEEAKAVLRLVPIWATTLVYGIIFAQIFTFFTKQGATMERTIFPGFDIPAASLQTLGTLAIVIFSPIYDRLFVPMARAITGKHSGITMLQRIGTGIFISIVTIVLAALVEMKRLKTAQESGLVDDPGATVPMSIWWLIPQYFLFGVSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIFGVGSFLSGFLISVIETVTGKDGQDSWFANNLNKAHIDYFYWLLAGFSVVGFAMFMCFAKSYVYNHKGASRV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0018 585 CDD MFS_NPF5 50 577 IPR044739 GO:0042937|GO:0042938|GO:0071916
Lja3g0018 585 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 107 131 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lja3g0018 585 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 34 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g0018 585 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 34 581 - -
Lja3g0018 585 Gene3D MFS general substrate transporter like domains 22 583 IPR036259 -
Lja3g0018 585 SUPERFAMILY MFS general substrate transporter 44 573 IPR036259 -
Lja3g0018 585 Pfam POT family 118 540 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0018 Lja-Chr3 259275 261463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0018 35 576 Organic Solute Cotransporters AT1G22540 65.498 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0018 K14638 - gmx:100776720 884.019