Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0013 ATGTCGTCGAATTGCGAGAACATGAATTCCAATTCCAGTTCCGTCGATCCAGACTCTTACGCCCTGGAGAAGTTCAAACTGTACGAAACCAGAGCTAGGTTTTACCTGATCGGAAGTGATCGGAACAAGAGGTTCTTCCGTGTTCTCAAAATCGATCGTTCAGAACCCTCCGATCTCAATCTCAGCCAAGACCCTGTCCTCTATTCCCCCCAAGAAATCAAGAGCTTGCTTCAGCGTATTGCTGAGGGTAACAAGGCCACTGGCGGTCTCTCTTTCGTCGCCAAGGTGTTCGGGATAGCCGGCTGCATCAAGTTCCTCGAGTCCTACTACTTGATTCTTGTTACTAAGCGCAAACAAATTGGTTCTGTATGCGGTCATGCAATCTATAGCATCAAGGAGAGCCAATTCATAACCATTCCACATGTTTCCATTCAATCTGATTTAGCTCACTCTAAAACTGAGCTCAGGTACAAAAAGCTTTTGTCCAGTGTTGACTTGACCAAGGATTTTTTCTTCAGTTACACTTACCCTATAATGCAAAGTTTGCAAAACAACGTCTTGTCCAATCAACAACCAGGGATGCCCTATGATAATATTTTTGTTTGGAATGCCTATTTAACCCAACCAATCAGATCAAGATGCAATAACACCATTTGGACCATAGCTTTAGTTCATGGTCATTTTAGGCAGATTCGCCTATCAATTTTTGGTAGGGACTTCAGTGTTTCCTTGATTTCTAGACGATCTAGACATTTTGCAGGGACACGTTACTTAAAAAGGGGAGTGAATGATCGTGGCAGGGTTGCTAACGATGTTGAGACAGAGCAGATTGTTCTTGATGAAGAAGCTGGCTCTTGCAAGGGCAAAATGAGTTCAGTTGTGCAAATGCGGGGATCAATACCGCTTTTCTGGTCACAGGAAGCATCGAGATTTAGCCCTAAGCCTGACATAATTTTGCAGAGGTATGATCCAACATACCAGGCAACTAAATTGCATTTTGAAGATCTTGCTATGAGATATGGAAATCCAATTATTGTTCTTAATTTGATTAAGACAGTTGAGAAGCGACCTCGAGAAATGATGCTAAGGCGTGAATTTGCAAATGCTGTTGGGTATTTAAACCAAATTCTACCGGTAGAGCACCATCTTAGATTTATTCACTGGGACTTTCACAAGTTTGCAAAAAGCAAGTCTGCCAATGTTCTGGCTGTTTTAGGAGCCGTAGCAAGTGAAGCGCTTGATTTAACAGGTTTTTACTACAGTGGCAAACCCAGCATAATAAAGAGGGCCAACAAGAGCAATCAAACAAGCACAGGAAGGGAAACTTCGCTGAGAGATCTGAGAGCTAGTTCTGGGGATCTTGCAAGGATTGGAAGCAATAGTGAAATTCTAAATTCTATTGTTAAACGAGACCGAGAGACTGACATGAACCATGAGAACAAAAAAGATAATTTTAGTAGTGAAGCTCCACATTTTCAGAGTGGAGTTCTTCGTACTAACTGCATCGATTGCTTGGACCGTACAAATGTCGCCCAGTATGCTTACGGTCTACAAGCTTTAGGGCGACAGCTCCATGCAATGGGTTTGACTGATGTGCCGAAAGTGGATCCTGATAGTAGTATTGCTGCAGCTCTAATGGATATGTATCAAAGTATGGGAGATGCTCTTGCCCAGCAGTATGGTGGTTCTGCAGCTCACAACACTGTGTTTCCAGAGAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAGTTCTTGAAATCCATAAAACGATACTATAGCAATGCTTACACGGATGGTGAAAAACAAGATGCAATAAACCTATTTTTAGGATACTTCCAACCACAGGAAGGGAAACCTGCTCTCTGGGAGCTTGATTCAGATTATTATCTCCATGTATCGGGGATTGGGGATGATTTAATCCCTGAGAAGTGTTCTGAACCAAATCTTAAGCCTTCTGGGAGAGTTGGAATAGTCTTCACCCCTGTACCGGCTTGTAGAGATGACTTTTCGCGCATAAAGTTGACATCGTTTGACAAGTTAATTGAGAAGACCTGTAGTACAATTAAGAATGTAAGACTTTGCAGTGAGCTTGATCAGAAACCAGGTGGTGGTTCTGGAAACAGTGGTGTAGCACCTGATGCAGCTGAGATACAGCTTAAAAGCCCAAATTGGCTTTTTGGCCAAAGAAAGTATGAAGAAGGTTCCTCTACTGCAAAAGTTGCTTCTCGTGAAACTGAAATTGAAGGATCTCATGCTAATGGCTTTTGCAACTTGAATTGGCTTTCCTCTGGTAATGACATGAATGAAGAGGATGTTTTCCAAAGGTACTTTACAATGACCTCAGTAGACGAGGCCAACGGTTGGTATGGAGGTACTCTCCTTGGTGATCAAGATGAAAGCAGTGAGATATATAAACATTATGCTGAGTTATGTCAGGGACCTGCCTTGGAACTTTTCCAAAATGATCCCGAGAGGGAGCAACACTACGCGGATGCTCTAATGAGTTCCTCTGAGATTGTTAATGATGCTGCAATTGCAGCTGAAATGGAAGCCACTCTAAAGGAGTATGACCAAGTTGGTGCCGACCTTGGGATAATTCCCTCATCTTGTAAATTCTTTGCTGATGACCCAAGTTGGTTAACAAGATGGTTAATTGGGGAAGAAAAGGTACCAAGGATATCTTGA 2691 0.4262 MSSNCENMNSNSSSVDPDSYALEKFKLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNLSQDPVLYSPQEIKSLLQRIAEGNKATGGLSFVAKVFGIAGCIKFLESYYLILVTKRKQIGSVCGHAIYSIKESQFITIPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQNNVLSNQQPGMPYDNIFVWNAYLTQPIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAMRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNQILPVEHHLRFIHWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRANKSNQTSTGRETSLRDLRASSGDLARIGSNSEILNSIVKRDRETDMNHENKKDNFSSEAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPEKCSEPNLKPSGRVGIVFTPVPACRDDFSRIKLTSFDKLIEKTCSTIKNVRLCSELDQKPGGGSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSTAKVASRETEIEGSHANGFCNLNWLSSGNDMNEEDVFQRYFTMTSVDEANGWYGGTLLGDQDESSEIYKHYAELCQGPALELFQNDPEREQHYADALMSSSEIVNDAAIAAEMEATLKEYDQVGADLGIIPSSCKFFADDPSWLTRWLIGEEKVPRIS* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0013 896 ProSiteProfiles Sac phosphatase domain profile. 161 562 IPR002013 GO:0016791
Lja3g0013 896 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 21 830 IPR043573 GO:0043813|GO:0046856
Lja3g0013 896 Pfam SacI homology domain 97 393 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0013 Lja-Chr3 216384 229655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0013 10 895 Acyl Lipid Metabolism Gene Families AT1G22620 75.982 0.0 1440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0013 K22913 - gmx:100800092 1652.49