Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0010 ATGCGCACTCTCTCATTACCATGTCTCTCTTCCTCTCTTCACACTCACAACTTCTCTCCCCCTTCGTCTTCTCTTATCTTCACATCCCACAGACGCTTTCACTTCCTCACCCCATGCTCATCCCTTAGACAGACCAAAAAGCAACAGCAACAGCAACAGCAGCAACTCACCAAGATCAACACTGCCCCATCTGGCTTCAAGCGCTTATTCAGTCCCAAGCCCGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGACGACGGCGACAAGAAACAACCAGACTCCGACACTGGCACCGCTTTGAAGGGTACTCTTTTGGCCGGTGTTTTGCTCCTTGGTTTTGTCGGGGGTTTTGCTGCCGTTGGCTATATCTACAGGGACCCCATCAATTCCTTCTTGAATCAGCTCTCCCTCTTCATAGAAGGTTATGGTCCAACTGGATATGCCATATTTGTAGCTGTTTATGCTGGATTGGAGATCCTTGCAATTCCTGCCATCCCTTTAACCATGTCAGCTGGACTTCTTTTTGGATCTGTTACAGGCACTGTCATAGTCTCTATTAGTGGAACGGTGGCAGCAAGTGTTGCGTTTCTAATTGCAAGATATTTTGCTCGTGAGCGTATTCTAAAACTAGTGGAAGGAAATAAGAAGTTTCTTGCGGTAGACAAAGCAATTGGAGAAAATGGCTTCAAGGTTGTGACCCTGCTTCGTTTGAGCCCTTTGCTGCCATTTTCTTTGGGGAATTATTTGTATGGATTGACATCTGTTAAGTTTCTTCCATATGTATTGGGAAGTTGGTTGGGGATGCTTCCAGGAACTTGGGCTTATGTTAGTGCTGGTGCTTTTGGAAGAGCAATAATTCAAGAAGAGTCTGAACTTAAAGTATTAGGAGGAAACAGTCAGCTGCTGACACTTGGGCTGGGACTGTTGGTCACTGCATTAGCTGCTACATATGTCACACGACTTGCGAAGGATGCTATTAAAGATATCGAATAG 1032 0.4486 MRTLSLPCLSSSLHTHNFSPPSSSLIFTSHRRFHFLTPCSSLRQTKKQQQQQQQQLTKINTAPSGFKRLFSPKPDDDDDDDDDDDDDDDDDDDDDDDDDGDKKQPDSDTGTALKGTLLAGVLLLGFVGGFAAVGYIYRDPINSFLNQLSLFIEGYGPTGYAIFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTVIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAVDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESELKVLGGNSQLLTLGLGLLVTALAATYVTRLAKDAIKDIE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0010 343 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g0010 343 MobiDBLite consensus disorder prediction 44 109 - -
Lja3g0010 343 PANTHER - 6 343 - -
Lja3g0010 343 Coils Coil 42 62 - -
Lja3g0010 343 MobiDBLite consensus disorder prediction 44 64 - -
Lja3g0010 343 Pfam SNARE associated Golgi protein 175 293 IPR032816 -
Lja3g0010 343 MobiDBLite consensus disorder prediction 75 102 - -
Lja3g0010 343 SUPERFAMILY ARM repeat 59 106 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0010 Lja-Chr3 189853 196787 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0010 - - vra:106756194 411.764