Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3435 ATGGCTGCATTCTTAGCTAGGAAATCACTTCAAGCTCTTCGACTGCAGAGCTCCCAGAATTATGGCATGCGATTAAGTGCACACTCCTACGCAGGGCCGGCCCTGGGCCTGTGCAAGCAGGCCCACAGCCCAGGGCCTCCAAAAAGAGGGGCCCAAAAAAAAATTCCCAAAGGCTACGATGACGAAGAAAGGGAGAAACTTGCAAGGGAAATTTCAAAGGATTGGAGTTCTGTGTTTGAACGTAGCATCAACACACTTTTTCTCACTGAACTAGTTCGAGGTCTAATGCTGACTCTGAAATACTTCTTTGAACAAAAAGTTACTATCAATTATCCATTTGAGAAAGGCCCTTTGAGCCCTCGTTTCCGCGGTGAACATGCACTCCGATGGTATCCAACAGGAGAGGAACGTTGCATTGCTTGCAAACTTTGTGAAGCTATATGTCCTGCTCGATTTGATATAAATTATAATCCAAAGAGTACTTATTGTAGCCAAATGGGCTCTATGTCCTACAGACAACAGCTATATAAACTTAGGCCATTTGGATCTGATCTATATCTGCCAGTTAGAGGAATTAGCAATGAGGATGAAGAAGAAACATTATTCAAATCAAACAAATTCAGCAGTTAA 630 0.4302 MAAFLARKSLQALRLQSSQNYGMRLSAHSYAGPALGLCKQAHSPGPPKRGAQKKIPKGYDDEEREKLAREISKDWSSVFERSINTLFLTELVRGLMLTLKYFFEQKVTINYPFEKGPLSPRFRGEHALRWYPTGEERCIACKLCEAICPARFDINYNPKSTYCSQMGSMSYRQQLYKLRPFGSDLYLPVRGISNEDEEETLFKSNKFSS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3435 209 MobiDBLite consensus disorder prediction 38 59 - -
Lja2g3435 209 Gene3D - 111 171 - -
Lja2g3435 209 PANTHER NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL 1 151 IPR010226 GO:0016020|GO:0016651|GO:0051539
Lja2g3435 209 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 8, MITOCHONDRIAL 1 151 - -
Lja2g3435 209 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 138 149 IPR017900 -
Lja2g3435 209 SUPERFAMILY alpha-helical ferredoxin 92 154 - -
Lja2g3435 209 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 128 159 IPR017896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3435 Lja-Chr2 79982012 79987575 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3435 K03941 - gmx:100499826 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3435 2 79982012 79987575 Lja2g3435 2 79982012 79987575 ECH