Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3405 ATGCTTCCTGAGTTCACTCATAAAATGAAATCAGGATTTAAAAGTGGCTGGTCCTCAGTTGTGCGTCTTCGTCTCAAAGACAAATCAGTCACCCCCTTTTGCGTATTCTCTAAAGTGAAATCAGCTGGTGACAAACCTGGGAATACACCTGTCTATCTCAATGTATATGATTTGACAACAGTAAATGGCTATATGTATTGGGCAGGCCTTGGTATTTTCCACTCTGGGGTGGAAGTTTATGGAGTAGAATATGCATTTGGAGCCCATGACTATCCAACAAGTGGTGTCTTTGAGGTTGAACCTCGGCAGTGTCCTGGCTTTAAGTTTAGGAAGTCAATATTCATGGGAACTACTAGCTTAGATCCTTTCCAGATTAGAGAGTTCATGGAGCGCCTGTCTGCAGATTATTATGGTGATAGTTATCACTTGATTGTGAAGAATTGCAATCACTTTTGTGATGATATCTGTTACAAGCTGACAGGGAATTCGATACCAAAATGGGTTAATCGTCTCGCAAGAATGGGTTCCTATTGCAATTGCGTACTCCCTGATGCCCTTAAAACTACCACTGTTCAGAATGATCCCGACTTTCAAGGGTGTGATAGTGAAAAAAGGAGGCTACGAACTGCCTTCAGTTGCTTGTCATCAATCTCAATGCCCCATAAGGAAGTATCAATGTCTTCCTTATTTTTGCACTCTCACTATAAAGGTTGCCTACCGCCGTGGGAGTTGAAGAAATCTAAAAAGGGCTCACTAAAGCAAAAATGA 768 0.4167 MLPEFTHKMKSGFKSGWSSVVRLRLKDKSVTPFCVFSKVKSAGDKPGNTPVYLNVYDLTTVNGYMYWAGLGIFHSGVEVYGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFMGTTSLDPFQIREFMERLSADYYGDSYHLIVKNCNHFCDDICYKLTGNSIPKWVNRLARMGSYCNCVLPDALKTTTVQNDPDFQGCDSEKRRLRTAFSCLSSISMPHKEVSMSSLFLHSHYKGCLPPWELKKSKKGSLKQK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3405 255 PANTHER DESUMOYLATING ISOPEPTIDASE 11 254 IPR008580 GO:0008233
Lja2g3405 255 ProSiteProfiles PPPDE domain profile. 49 186 IPR008580 GO:0008233
Lja2g3405 255 SMART DUF862_2a 49 187 IPR008580 GO:0008233
Lja2g3405 255 Gene3D PPPDE domains 44 198 IPR042266 -
Lja2g3405 255 Pfam PPPDE putative peptidase domain 50 184 IPR008580 GO:0008233
Lja2g3405 255 PANTHER DESI-LIKE PROTEIN 11 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3405 Lja-Chr2 78485536 78490904 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3405 - - vra:106777543 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3405 2 78485536 78490904 Lja2g3405 2 78485536 78490904 ECH