Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3401 ATGTATTCCACAAGCAAGTCTTTCCGGAAAGAAACAAGCATTACCAACACCAAATGCAAATTCCCTTTCAAATGTGATGGTTGCAAGGAAGTTGGCATAGGCTCACGCTACAAGTGCTCCTCCATTTGTGACTATGATCTTCACATGCATTGTGCCATTCCTTCCCCTTCTCTGTACCACCCTTTCTACCCGAAATGCTCCTTCCAGTTTCTCTCCAAGCCACCAGGTAGGGACCACACTAGGTCTATAAAAAAATTTGTCAATAGAACATTAATCAAGCTTTACCTCTACAGGAAAGTGAGTTCACCGTGTCATCGTTGTGGACAGAAGGGGCGTAGCTGGAGTTACAGGTCATCATGCAAGAAGTGCAATCTGCATGTGGCGTGTGTGAGGGAGATGATTGTGGAGAGTTGGCACCAGATTTACATTGGAAGGAGCAAGAGCAATAATGGAATGAAAATGATGGAGAATGGGATTCCAAGCCTCAAAAATACACTGCAGGCAAGTCATAACAGCAGGATCAAAGGGAAGGTGAGGAAATGCTGTGAGATAGCTGGAATGGCTGTGCAGGTTGTGGTGTCTGCTGTGTTGGGAGATCCAACGGCTCTGATTGCTGGGATTATGGGGTCAGTGATGTCACGGGCTTGA 648 0.4614 MYSTSKSFRKETSITNTKCKFPFKCDGCKEVGIGSRYKCSSICDYDLHMHCAIPSPSLYHPFYPKCSFQFLSKPPGRDHTRSIKKFVNRTLIKLYLYRKVSSPCHRCGQKGRSWSYRSSCKKCNLHVACVREMIVESWHQIYIGRSKSNNGMKMMENGIPSLKNTLQASHNSRIKGKVRKCCEIAGMAVQVVVSAVLGDPTALIAGIMGSVMSRA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3401 215 Gene3D - 14 63 IPR043145 -
Lja2g3401 215 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 9 77 - -
Lja2g3401 215 Coils Coil 214 215 - -
Lja2g3401 215 SUPERFAMILY Cysteine-rich domain 28 131 IPR046349 -
Lja2g3401 215 Pfam C1 domain 22 52 IPR004146 -
Lja2g3401 215 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 90 214 - -
Lja2g3401 215 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 9 77 - -
Lja2g3401 215 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 90 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3401 Lja-Chr2 78285302 78286249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3401 - - mtr:MTR_1g034390 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3401 2 78285302 78286249 Lja2g3401 2 78285302 78286249 ECH