Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3400 ATGCCAGAGGTTTACACTGTTAAGGTTGAGGAGGGAAAGCCTGCAACTGAAGGAAAGCCATCAGTAGGACCAGTGTATAGGTGCATTTATGCCAAAGATGGTTTGTTGGAGTTGCCTTCTGGTGTGGAGTCCCCATGGGATTTCTTCAGGGACTCTGTTAAGAGGAACCCTAACAACCCAATGCTGGGAAGGCGTCAAAAGCTAGAATCTAAGGTAGGTCCATATTCATGGCTTACATATAAAGAGGTTTATGATGCTTCCATCAAATTGGGGTCTGCCATGAGGAACCTTGGTGTCAATCCTGGTGATCGTTGTGGCATATATGGTTCCAACTGTCCTGAATGGATCATTGCAATGGAGGCCTGCAATAGCTGTGCAGTAACATATGTTCCCTTATATGACACACTTGGTCCTAATGCAGTGGAGTTTATCATAAATCATGCTGAAGTTTCAATTGCATTTGTACAGGAAAAAAAGATTGCATCAATTTTGTCATGTCTTCAACAATGTTCTTCCAATCTTAAAACTATTGTGAGCTTTGGAAATATTTCAACTTCACAAAAGAAAGAAGCCGAGGAGCATGGCACATCCTGCTTCTCATGGGGAGAGTTTCTCCAGTTGGGAAGTTTTGATGGGGATCTACCATCAAAAAATAAGACAGACATTTGCACAATAATGTATACAAGTGGAACAACTGGAGAACCCAAAGGTGTCATTATTAAGAATGAGGCTTTCATGGCTGAAGTGTTGTCTATTGACCAAATAATCTTCTTAACAGGTAGAGTGGCAGGAGAGGATGATGTATACTTCTCCTTTCTTCCTCTCGCTCATGTATATGACCAGATAATGGAGACCTATTGCATCCACAAGGGCTCCTCAATAGGATTTTGGCAAGGCGATGTCAGGTTCTTGATGGAAGATATTCAGGTGCTGAAACCAACTATATTTTGTGGTGTTCCTAGAGTTTTTGACCGCATTCATGCCGGTATCAATAGCAAAGTTTCATCTGGAGGAGCACTGCTAAGTACAATATTTCAGTATGCATACAACTACAAGTTAAGAAATCTTGAGAAGGGTCTTCCACAGCACAAAGCAGCACCTCTGTTTGATAGGCTTGTTTTTGATAAGACAAAACAAGCACTAGGTGGGCGAGTCCGAATCCTGTTATCAGGAGCTGCTCCATTGCCTAGGCATGTAGAGGAGTTTTTGAGAGTCACTAGTGGATCTACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCAGGGTGCTTCACTGCAATTGGAGATGTGTTTTCTATGACTGGAACAGTTGGAGTTCCTATGACAACCATTGAGGCCAGGCTTGAATCTGTGCCAGAAATGGGATATGATGCACTTTCCAATGAACCTCGTGGAGAAATTTGCCTGAGAGGAATTACCTTGTTCTCTGGTTATCATAAGCGTCAGGATCTTACTGAAGAGGTTATGGTTGATGGTTGGTTTCATACAGGTGACATCGGAGAATGGCAAACTAATGGAGCCATGAAAATTATTGATAGGAAGAAAAATATATTCAAATTGTCTCAAGGAGAATATATTGCTGTGGAAAATATTGAAAACAAGTATTTGCAATGCCCTCTTATAACATCGATTTGGGTGTATGGAAACAGTTTTGAGTCATTCTTGGTGGCTGTGGTGGTCCCTGAAAGAAAGGCCATTGAGGATTGGGCAAAAGACCATGATTTGACAGAGGATTTTAAATCTTTATGTGAAAATCTGAAAGTGAGAAAATACATTTTGGATGAGCTCAACCGCACTGGTCAGAAACAACAACTTAGGGGTTTTGAGCTGCTAAAATCTGTTCATCTGGAACCAAATCCCTTTGACATGGAGAGAGATCTGATAACTCCAACATTCAAATTGAAGAGACCACAATTGCTCAAGTGTTATAAGGATCATATTGACCAACTATACAAGGAAGCAAAGGGAACAAAGGTGTAA 1983 0.4105 MPEVYTVKVEEGKPATEGKPSVGPVYRCIYAKDGLLELPSGVESPWDFFRDSVKRNPNNPMLGRRQKLESKVGPYSWLTYKEVYDASIKLGSAMRNLGVNPGDRCGIYGSNCPEWIIAMEACNSCAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQEKKIASILSCLQQCSSNLKTIVSFGNISTSQKKEAEEHGTSCFSWGEFLQLGSFDGDLPSKNKTDICTIMYTSGTTGEPKGVIIKNEAFMAEVLSIDQIIFLTGRVAGEDDVYFSFLPLAHVYDQIMETYCIHKGSSIGFWQGDVRFLMEDIQVLKPTIFCGVPRVFDRIHAGINSKVSSGGALLSTIFQYAYNYKLRNLEKGLPQHKAAPLFDRLVFDKTKQALGGRVRILLSGAAPLPRHVEEFLRVTSGSTLSQGYGLTESCAGCFTAIGDVFSMTGTVGVPMTTIEARLESVPEMGYDALSNEPRGEICLRGITLFSGYHKRQDLTEEVMVDGWFHTGDIGEWQTNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLITSIWVYGNSFESFLVAVVVPERKAIEDWAKDHDLTEDFKSLCENLKVRKYILDELNRTGQKQQLRGFELLKSVHLEPNPFDMERDLITPTFKLKRPQLLKCYKDHIDQLYKEAKGTKV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3400 660 Gene3D - 38 514 IPR042099 -
Lja2g3400 660 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 656 - -
Lja2g3400 660 Pfam AMP-binding enzyme 49 522 IPR000873 -
Lja2g3400 660 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 656 - -
Lja2g3400 660 SUPERFAMILY Acetyl-CoA synthetase-like 43 653 - -
Lja2g3400 660 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Lja2g3400 660 CDD LC-FACS_euk 73 653 IPR045311 GO:0004467|GO:0006631
Lja2g3400 660 Pfam AMP-binding enzyme C-terminal domain 532 600 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3400 Lja-Chr2 78264017 78272213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3400 5 656 Acyl Lipid Metabolism Gene Families AT1G64400 56.422 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3400 K01897 - gmx:100779735 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3400 2 78264017 78272213 Lja2g3400 2 78264017 78272213 ECH