LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g3392	ATGGCTACCCTTCTAAGGAAGTTGAAGGCTTCTGTGCCTCCTACTGTTACTGTGGAAAGTGAAGACAGCATTAGCAGCTATGAGTACTCTTTTGCCTTGGTGTACAATGGCCCTCCTCTCAGTTACTCCATCCCTGAAGTCCCTGCTTTCAAAATTGACCAAATCCCAATTGCAGCTATAGCTCCTGTTTCTGATGATTTCTCTGTCCCAGTTATCCAACCACTTGGTAAACCTCATTATAGAAAGAAGCAAAGACACAAACTTTTATCACCAGATTCTTCCCTGTCTCCAAATTTGGACTCTCATGCATCAAACAGTGATGCTGATGATGTGCTTGAATGCAAGGGTACTTTGGGATCACCTGGAGTTGATGATGACAGAGATATCAGAGAGTTTCACAGTGGAACGACTCTGGTTCCTAAAAACTCTGATACCACAGAATCAGAATCAGATTCAAGCTCTTGTTTTGGTTCTTTTGAGATTTGCTCATTCAGAGAAGATGAGCCAAAGGTAGAAACTCCAAGAACAAGACATGCTAAGCGTCCTTCTGCGGTGACATTTCGTGATCCTGAGTCAAATGACATGTTAGAAGCCAGTAGTCAGGAGTATTTTAGTTCTCAGATTGGAAGTACTAGTATTTTCCCTGTGAAGCCACATGCTGTGAGACCAGGGAAGAAAGGCACTTGCTATAGGTGCCTTGAAGGGAATCGTCTCATGTCGAAGGAGGTTTGCATTGTGTGCAGTGCAAAGTATTGCCGCGGCTGCGTGATAAGGGCAATGGGGTCCATGCCTCAGGGAAGGAAATGTGTTACTTGCATCGGTTATGGGATTGATGAGGAAAAGAGGGGGAAGCTGGGCAAATGTTCTTGGTTGCTGAAGCAGTTACTTTCTGAGTTTGTGGTTGCTCAAGTCATGCTTGATGAAAGGTCTTGTGAAGTAAATCAAATACCACCAGAGCTTGTTGTAGTGAACTCACAACCACTTGATAGGGAACAACTCATGTTGCTCCTTAACTGCTCAAACCCACCAAAGCAATTAAAACCAGGATTCTATTGGTATGATAAATCAATTGGATTTTGGGGAAAGGAAGGTCAACCCCCTTGTGAAGTTATCAGCCCCCAGCTAGATGTCGGGGGTCGCATGCAGAAAACTGCAAGCAATGGAAACACAAATGTTACTATTAATGATCGCGAGATTACTAAAAAGGAGCTTGTGATACTTAAGATAGCAGAAGTGCCCTGTGAAGGAACGCCCAACTTTTGGGTGAGTGCTGATGGGTCATACCGGGAAGAGGGGCAGAAGAAAGACCGGGGGCGTATATGGGATAAGCGGCGAACAAAGTTTGTTTCTGCAATTCTATCTTTGCCAGTTCCTTCAATTGTTACTCTTTCTGATGAAGGTGAAATAGCCAAGATACAGAGCCTTCAAAAGAAAACACTTCACAAATTTCTACTTGTTGGTTCTGTCAATTCAGGAGCATGTACTATATTTAAACAGGCCAAGATTCTTTATGATTGTCCATTCTCTGAAAATGAGCTCCAAAATATCAAGTTGGTGATCCAATGCAACCTGTTTACCTACCTCGGTATACTGCTGGAAGGGCGTGAAAAATTTGAAGAAGAGTGTTTGCTGGAGAATAAAGAAGGATTGCCTCATAATGAAACCTCTTCATCTGGGAATACCGGTGATAATGTTGCCACAACACTCTATACCATTGGCTCAAGACTGAAAGGTTTCTCAGATTGGCTACTAAAATACATGGTGTTAGGGAACTTGGATGCAGTATTTCCAGCTGCTATACGCGAATATGGACCACTGGTTGAGGGTTTATGGAGGGATGAGGCGATTCAGGCGACATATAACAGGAGAAATGAACTAACGATGCTACCAAGAAGTGCTAACTATTTTCTAGACCGGGCTGTTGAAATTTCCAAGATTGACTATGAACCCTCTGATATGGACATCTTGTATGCTGAGGGGTTATCCTTATCCAACAGCCTCACTTCAATGGAATTTTCATTTCCCAAGTTAAGGAGTGAGGAGTCTTTGTATCCTGAGTATCAACATGAATCTTCTCTCAGATACCAACTGATCAGAGTGCATCCTAAAAGCCTTGGAGAAAACTGCAAGTGGTTGGAGATGTTTGAAGACACAGATGTTGTATTGTTTTCTGTAGCCTTAACTGACTATGATGAGTACATTGTAGACAATAAAGGAGTTGCTACCAACAAAATGATGGTAGCTAAGCATCTCTTTGAAAACATCATTGCTCATCAAACCTGCCGCAACAAAAAATTTCTGTTAATACTTACAAAATTGGACCTGCTTGAGGAAAAGATTGAACTGGTTCCCCTTACAAGATGTGAATGGTTTTGTGACTTCAACCCGGTTATCAGTCACAATCACAAGAAAGGTGGTAACAATGGCAATAGCCCTCCGTTAGCTCAAAGTGCTTTTCAATATATTGCTGTGAAGTTCAGGAGATTGTTTCGTTCTCTCACGGACCGAAAGCTGTTTGTTTCACTGGTTACTGGGTTGGAACGTGACACCATTGATGAGGCTTTCAGATATGGCAGGGAAGTTATGGAGTGGGAAAAATGGGATCCCTCTCTTGTAACAGAGAAGTCAGAGATTACTTCAACAAGCATTGATGAGGCAAGCTCCTCGTGA	2670	0.4258	MATLLRKLKASVPPTVTVESEDSISSYEYSFALVYNGPPLSYSIPEVPAFKIDQIPIAAIAPVSDDFSVPVIQPLGKPHYRKKQRHKLLSPDSSLSPNLDSHASNSDADDVLECKGTLGSPGVDDDRDIREFHSGTTLVPKNSDTTESESDSSSCFGSFEICSFREDEPKVETPRTRHAKRPSAVTFRDPESNDMLEASSQEYFSSQIGSTSIFPVKPHAVRPGKKGTCYRCLEGNRLMSKEVCIVCSAKYCRGCVIRAMGSMPQGRKCVTCIGYGIDEEKRGKLGKCSWLLKQLLSEFVVAQVMLDERSCEVNQIPPELVVVNSQPLDREQLMLLLNCSNPPKQLKPGFYWYDKSIGFWGKEGQPPCEVISPQLDVGGRMQKTASNGNTNVTINDREITKKELVILKIAEVPCEGTPNFWVSADGSYREEGQKKDRGRIWDKRRTKFVSAILSLPVPSIVTLSDEGEIAKIQSLQKKTLHKFLLVGSVNSGACTIFKQAKILYDCPFSENELQNIKLVIQCNLFTYLGILLEGREKFEEECLLENKEGLPHNETSSSGNTGDNVATTLYTIGSRLKGFSDWLLKYMVLGNLDAVFPAAIREYGPLVEGLWRDEAIQATYNRRNELTMLPRSANYFLDRAVEISKIDYEPSDMDILYAEGLSLSNSLTSMEFSFPKLRSEESLYPEYQHESSLRYQLIRVHPKSLGENCKWLEMFEDTDVVLFSVALTDYDEYIVDNKGVATNKMMVAKHLFENIIAHQTCRNKKFLLILTKLDLLEEKIELVPLTRCEWFCDFNPVISHNHKKGGNNGNSPPLAQSAFQYIAVKFRRLFRSLTDRKLFVSLVTGLERDTIDEAFRYGREVMEWEKWDPSLVTEKSEITSTSIDEASSS*	890

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g3392	889	SUPERFAMILY	Transducin (alpha subunit), insertion domain	508	658	IPR011025	GO:0007165
	Lja2g3392	889	MobiDBLite	consensus disorder prediction	170	187	-	-
	Lja2g3392	889	PRINTS	Alpha G protein (transducin) signature	648	670	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	PRINTS	Alpha G protein (transducin) signature	718	746	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	PRINTS	Alpha G protein (transducin) signature	482	497	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	PRINTS	Alpha G protein (transducin) signature	766	775	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	MobiDBLite	consensus disorder prediction	170	192	-	-
	Lja2g3392	889	Gene3D	-	509	655	IPR011025	GO:0007165
	Lja2g3392	889	MobiDBLite	consensus disorder prediction	90	105	-	-
	Lja2g3392	889	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	477	857	IPR027417	-
	Lja2g3392	889	MobiDBLite	consensus disorder prediction	120	134	-	-
	Lja2g3392	889	MobiDBLite	consensus disorder prediction	80	154	-	-
	Lja2g3392	889	ProSiteProfiles	G-alpha domain profile.	479	878	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	Gene3D	-	656	869	IPR027417	-
	Lja2g3392	889	Pfam	G-protein alpha subunit	473	858	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	SMART	galpha_1	463	846	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	22	886	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Lja2g3392	889	MobiDBLite	consensus disorder prediction	136	154	-	-
	Lja2g3392	889	PANTHER	EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2	22	886	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja2g3392	Lja-Chr2	77768487	77774194	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g3392	-		-	gmx:112997598	1194.1

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja2g3392	2	77768487	77774194	Lja2g3392	2	77768487	77774194	ECH