Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3385 ATGGGTACCCCCCTTAAACCAGCAACAACAATGGATACCATCAATGATCTCATCGAAGAGGCCAAGCTTCGTTTTCTTTGGTGGGCTCTTTGTATATTCGCCATTTCCTATTTCTTAACTCATACAAGTAAGTCAATGTGGATGAATATACCCATGTCCATTCTTGTTGCTTGTGCTCTGCGGATTATTCTGAACAAGGTGGAGTTCCGTTGGAAGGTTCAACCACCTAGATCGCAGACTTACCTATCTCATTTGGAGAAAAAGCAGTTGTCTCCGGACAATGCTAGCCTCTCTACTTTACCTGGTCCTCCTGAATGGAAGAAGAAGATTGATTCACCCGTGGTAGAGGCTGCCTTGAACGATTTCATGGATTTGATATTGAAGGATTTCGTGATAAATATGTGGTACGCAGACATTACTCCAGATGGGGAGTTTCCTGAGCAGATACGCGACTTAATCATGGATGCTCTTGCTGAAGTGTCTGTAAGGGTCAAAGATATAAACCTTGTTGACTTGCTCACAAGAGATATAGTTGATTTAATAAGTGATCATATAGACCTTTTCAGAAGAAATCAAGCTGCTATAGGTGTTGATGTTATGTTAACATTATCTTCAGAGGAGAGGGACGAGAGATTGAAATTCCACCTGTTGAATTCTAAGGAGCTTCATCCAGCACTAATATCTCCAGAGAGTGAGTACAAGGTTCTTCAGCGGCTAATGAGTGGACTATTAGCAACAGTGCTTAGAAAACCGGAAGTTCAATGTCCTGTCATTCGATCTATAGCACGGGAAATTTTAACTTGCTTGATTTTGCAACCTGTACTGAACTTGGCAAGCCCTGCGTATATTAATGAGCTGATTGAATCTCTTCTACTTATCCTCAATAATGAGGGTTCAAATTGGACGGGTGGAGGTGATCAATCAACTGATGCTACAAATCATAATCATGGTCATTCGGTTGGTGGACATGATAGTCACACAGGCTCTGCTGACTGGGCACAGATGCTAGAGGCTGCAACTCAGAGAAGAACTGAAGTTCTTATGCCGGAGAATCTTGAGAACATGTGGGCACGAGGAAAGAATTACAAAAGGAAAGGGAATAAAAAGGCCAAAGATCATGCTACAGATCATTCACTGCCTGATAGAAATTTGGCTCAGGAAACATCAGTGAGTAAACCTGGAACATATGCAGTTCCTGAAGGAAAGTCGTCATCGCATCCATTGCATACTGTGGGTTCTGATCCGCTAATAAATATTGGAAACACAACTAGGTCAGAGTCTTCACCAGATCCCGAAAAGGAATTATCCTTTGGAGCTGATCATCAAGTTGATGAAGGGAATGATATCAAGGATCACACTTCTAGTAAGCATACAATTCCGCTCAAGAGATCCAGCAGTTCTTCTGTCTTGGGAATCCAACCTCATAATGGATGGTCCATTGTGTCAGAGTTCTACACGCCTGACCTTGAGAAGCGCGGTGAAGGACTTCGAGGAAAGAGTGGTTCTGACATGGTGGTTAGGAGAGAGGGACTTTCTGTTCCCAAGCTTCGGTGCCGGGTCATGGGAGCATATTTTGAGAAACTTGGATCCACATCTTTTGCCGTATATTCAATTGCAGTGACTGATGGGCAAGAGAATACTTGGTTTGTAAAACGAAGGTACAGGAATTTTGAGCGATTGCATCGGCATCTAAAAGATATTCCGAATTACTCATTGCATTTGCCTCCCAAAAGGATATTTTCCTCAAGTACAGAGGATGCCTTTGTCCATCAGCGTTGCATTCAACTGAATAAATATCTACAGGATCTCCTGTCAATAGCTAATGTTGCTGAGCAACATGAAGTTTGGGACTTTCTTAGTGTTTCCTCAAAGAATTACTCTTTTGGGAAATCTTCTTCAGTGATGAGGACCCTGGCAGTAAATGTAGATGATGCTGTGGATGATATTGTACGCCAGTTTAAAGATGTTTCAGATGGTTTAATGCGAAAAGTTGTTGGTGCATCACCCACCACCACTGAAGGTTCTACTACATCTACCACTTGGAACACTTGGAATATGGATGAAATGGATAAAAGTATTCTGAGGCAAAATGCTGTAGAGAGTGCTTTAAGCTCTGATAATGAGGAAGGTGAAAAAGAAGTTAATATTGATAGAGAAGCAGCAGAAGATAATGAGTGGCATTCTGACAATGAATTGACCTTGAAGGATTATTCACAGCAGATCATAAACCCTGGTAATGAGTCTGCTAACTTGGATCAAGATCGGAAACATGATGTGATGATGGAAGCAAAGGTTGGCAAGGATGTTCCACCTACAAATCCCACTCTACTCCCTGATTATTTGGACGATCCAGTTGGTGTGCCACCTGAGTGGGCCCCACCTAATGTGACTGTCCCTATTCTGAATTTGGTTGATAACATATTTCAGCTTAAGAAAAGAGGCTGGCTAAGAAGACAGGTATTTTGGATATCAAAACAGATATTACAGGTTGTCATGGAAGATGCTATAGATGATTTGCTCCTAAGTGAGATTCATTGGCTCCGCAGAGAGGATACCATTGCCCAAGGGATTCGGTGGGTCCAAGATATCCTCTGGCCCGGTGGCAAATTTTTTTTAAGAGTACAGACCCCTCAGTTATTCATTGGTGGCAATGTAATTGATCAAAATCCTTTACAAACCATTGAATCTTGTGGGAGCAAGATTGGCAAGTCACAGTCAGGATCTTTTGAGCAACAGCTTGAGGCTGCTCGTAGAGCAAGTGACCTGAAGAAACTGCTCTTTGATGGAGCTCCCGCAGCCTTAGTCAGTTTAATCGGGCAGAAACAGTACAGACGTTGTGCCAGTGATATATATTACTTCAGTCAGTCTTCTATATGTGTAAAGCAACTTGCTTATGCAATCCTTGAACTCCTGCTCATATCTGTCTTCCCTGAGTTGCGCAATGTTGTCATGAGTGTTCATGAGAATATGCATGTTCACCAACCTGTATAG 2991 0.4226 MGTPLKPATTMDTINDLIEEAKLRFLWWALCIFAISYFLTHTSKSMWMNIPMSILVACALRIILNKVEFRWKVQPPRSQTYLSHLEKKQLSPDNASLSTLPGPPEWKKKIDSPVVEAALNDFMDLILKDFVINMWYADITPDGEFPEQIRDLIMDALAEVSVRVKDINLVDLLTRDIVDLISDHIDLFRRNQAAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLMSGLLATVLRKPEVQCPVIRSIAREILTCLILQPVLNLASPAYINELIESLLLILNNEGSNWTGGGDQSTDATNHNHGHSVGGHDSHTGSADWAQMLEAATQRRTEVLMPENLENMWARGKNYKRKGNKKAKDHATDHSLPDRNLAQETSVSKPGTYAVPEGKSSSHPLHTVGSDPLINIGNTTRSESSPDPEKELSFGADHQVDEGNDIKDHTSSKHTIPLKRSSSSSVLGIQPHNGWSIVSEFYTPDLEKRGEGLRGKSGSDMVVRREGLSVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQENTWFVKRRYRNFERLHRHLKDIPNYSLHLPPKRIFSSSTEDAFVHQRCIQLNKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFKDVSDGLMRKVVGASPTTTEGSTTSTTWNTWNMDEMDKSILRQNAVESALSSDNEEGEKEVNIDREAAEDNEWHSDNELTLKDYSQQIINPGNESANLDQDRKHDVMMEAKVGKDVPPTNPTLLPDYLDDPVGVPPEWAPPNVTVPILNLVDNIFQLKKRGWLRRQVFWISKQILQVVMEDAIDDLLLSEIHWLRREDTIAQGIRWVQDILWPGGKFFLRVQTPQLFIGGNVIDQNPLQTIESCGSKIGKSQSGSFEQQLEAARRASDLKKLLFDGAPAALVSLIGQKQYRRCASDIYYFSQSSICVKQLAYAILELLLISVFPELRNVVMSVHENMHVHQPV* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3385 996 PANTHER SORTING NEXIN CARBOXY-TERMINAL PROTEIN 10 995 - -
Lja2g3385 996 Pfam Sorting nexin C terminal 815 957 IPR013937 -
Lja2g3385 996 ProSiteProfiles PXA domain profile. 112 291 IPR003114 -
Lja2g3385 996 CDD PX_SNX19_like_plant 516 620 - -
Lja2g3385 996 MobiDBLite consensus disorder prediction 359 469 - -
Lja2g3385 996 PANTHER PX SERINE/THREONINE KINASE PXK 10 995 - -
Lja2g3385 996 SMART PX_2 512 622 IPR001683 GO:0035091
Lja2g3385 996 MobiDBLite consensus disorder prediction 304 318 - -
Lja2g3385 996 SMART PXA_3 112 297 IPR003114 -
Lja2g3385 996 MobiDBLite consensus disorder prediction 304 328 - -
Lja2g3385 996 SUPERFAMILY PX domain 516 623 IPR036871 GO:0035091
Lja2g3385 996 Gene3D - 517 631 IPR036871 GO:0035091
Lja2g3385 996 MobiDBLite consensus disorder prediction 427 458 - -
Lja2g3385 996 ProSiteProfiles PX domain profile. 514 626 IPR001683 GO:0035091
Lja2g3385 996 MobiDBLite consensus disorder prediction 406 426 - -
Lja2g3385 996 Pfam PX domain 544 621 IPR001683 GO:0035091
Lja2g3385 996 Pfam PXA domain 112 290 IPR003114 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3385 Lja-Chr2 77475413 77486967 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3385 K17925 - gmx:100804013 1482.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3385 2 77475413 77486967 Lja2g3385 2 77475413 77486967 ECH