Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3381 ATGCCAATGGGAGAGATTGATCCAGTTTTCATTCAGGCTCCAGAGCACAGACCCAAGCTCAGTGTCAAAGAAGCAGAAGGCATCCCTGTGATAGACATGTCCCCTCTATTATCATCAGATGATGATTCCATAATTTCTAACACAGACCCTTTAGCCATTCAAGAGCTTGTGAGGCAAGTAGGTAGTGCATGCAAGGAGTGGGGGTTCTTCCAGGTGATCAATCATGGAGCTCCTCTTGAGAGCAAGCAGAGGATTGAATCAGTTGGTAAGAAATTCTTTACTCAGAGCTTGGAGGAGAAGAAGAAAGTGAGGAGGGACACTGTGAAGGTTATGGGGTATTATGAGAGTGAGCATACCAAGAATGTTAGGGATTGGAAGGAAGTGTTTGATTTTACTGTGGAGGAACCTACCTTGATTCCAGCTTCAATTGACCCAGATGACAAGGAGATCACTCAATGGTATAATCATTGGCCAGAGTACCCACCAGAGATGAGAGAGACATTCCAAGAATATGCTCACCACATGGAAAAACTAGGGCTGAAGTTAATGGAGCTTATCGCCATGAGTTTGGGTCTGCCCTCAAAGCGATTTCATGGGTTCTTTAAGAACCAAACAAGCTGGATTAGGCTGAACTATTATCCACCATGCCCAAACCCTGACATTGTTTTAGGGTGTGGCCGTCATAAGGATTCTGGTGCTTTAACCATCCTCGCTCAAGATGAAGTTAGTGGGTTACAAGTGAGGAGAAAATGTGATGGTCAATGGGTTCGACTCAATCCCTTACCTGATGCTTATATTATCAATGTTGGAGACGTAATTCAGGTTTGGTGCAATGACGCGTACGAGAGTGTGGAGCACAGAGTGAAGCTGAACCCTGAGAAGGCAAGGCTTTCGTATCCATTTTTTCTCTATCCTTCACATTACACTAATGTGGAGCCTTTGGAAGAGCTTACAAATGAGGAAAACCCTCCCAAATACACGCCTTACAACTGGGGAAAGTTTTTTGTTACGAGGAAGCGTAGCAACTTCATGAAACTTGATGAAGAGAACGTTCAGGTAGCAAATACATCATATCATGATTAA 1083 0.4386 MPMGEIDPVFIQAPEHRPKLSVKEAEGIPVIDMSPLLSSDDDSIISNTDPLAIQELVRQVGSACKEWGFFQVINHGAPLESKQRIESVGKKFFTQSLEEKKKVRRDTVKVMGYYESEHTKNVRDWKEVFDFTVEEPTLIPASIDPDDKEITQWYNHWPEYPPEMRETFQEYAHHMEKLGLKLMELIAMSLGLPSKRFHGFFKNQTSWIRLNYYPPCPNPDIVLGCGRHKDSGALTILAQDEVSGLQVRRKCDGQWVRLNPLPDAYIINVGDVIQVWCNDAYESVEHRVKLNPEKARLSYPFFLYPSHYTNVEPLEELTNEENPPKYTPYNWGKFFVTRKRSNFMKLDEENVQVANTSYHD* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3381 360 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 4 349 - -
Lja2g3381 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 305 IPR005123 -
Lja2g3381 360 Gene3D - 2 343 IPR027443 -
Lja2g3381 360 Pfam 2OG-Fe(II) oxygenase superfamily 207 303 IPR044861 -
Lja2g3381 360 PRINTS Isopenicillin N synthase signature 293 311 - -
Lja2g3381 360 PRINTS Isopenicillin N synthase signature 228 249 - -
Lja2g3381 360 PRINTS Isopenicillin N synthase signature 60 77 - -
Lja2g3381 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 28 159 IPR026992 -
Lja2g3381 360 SUPERFAMILY Clavaminate synthase-like 3 341 - -
Lja2g3381 360 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 4 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3381 Lja-Chr2 77281576 77284613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3381 19 326 Glycosyltransferase AT5G59530 35.962 1.59e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3381 - - tcc:18607872 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3381 2 77281576 77284613 Lja2g3381 2 77281576 77284613 ECH