Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3380 ATGGGAGAGATTGATCCAGCTTTCGTTCAGGCACCAGAGCACAGACCCAAGCTCAGTGTCATAGAAGCTGAAGGAATCCCTGTGATTGACATGTCCCCTCTGTTATCATCAGATGATGCAATTTCCAACACAGACCCTTCAGCCATTGAAGAGCTTGTGAGGCAAGTGGGCAGTGCATGCAAGGAGTGGGGGTTCTTCCAGGTGATCAATCATGGAGCTCCTCTTGAGAGCAAGCAGAGGATTGAATCAGTTGGGAAAAAATTCTTTGCTCAGAACTTGGAGGAGAAGAAGAAAGTGAGGAGGGATATTGTGAAGGTGATGGGATATTATGAGACTGAGCATACCAAAAATGTTAGGGATTGGAAGGAAGTGTTTGATTTTACTATGGAGGAACCCACCTTGATCCCAGCTTCAATTGACCCTGATGACAAGGAGATCACTGAGTGGTACAATCAGTGGCCAGAGTTCCCCCCAGAGATGAGAGAGACCTTCCAAGAATATGCTCATCACATGGAAAAGCTAGCACTCAAGTTAATGGAGCTTATTGCCATGAGTTTGGGCCTGCCCCCAAAGCAATTTCATGGGTTCTTCAAGGACCAAACAAGCTGGATTAGGCTTAACTATTATCCACCATGCCCAAACCCTGACCTTGTTTTAGGGTGTGGTCGTCACAAGGATTCTGGTGCTTTAACGGTTCTAGCCCAAGATGAAGTTCCTGGGTTAGAAGTGAGGAGAAAATCTGATGGTGAATGGGTTCTGGTCAAGCCCTTACCTGATGCTTATATCATCAATGTTGGAGACGTAATTCAGGTTTGGTGCAATGACGCATATGAGAGTGTTGAGCATAGAGTGATGCTGAGTGCTGATAAGGCAAGGCTTTCATACCCGTTCTTTCTGTTCCCTGCACACTACACCAATGTGCAGCCTCTGGAGGAGCTTACAGATGAACAAAACCCTCCCAAATACAGGCCTTACAATTGGGGAAAGTTTTTAGCTACGAGGAAGCGTAGCAACTTCATGAAACTTGATGTGGAGAACATCCAAATTCATCATTTCAGGATTAATAATTAG 1071 0.4538 MGEIDPAFVQAPEHRPKLSVIEAEGIPVIDMSPLLSSDDAISNTDPSAIEELVRQVGSACKEWGFFQVINHGAPLESKQRIESVGKKFFAQNLEEKKKVRRDIVKVMGYYETEHTKNVRDWKEVFDFTMEEPTLIPASIDPDDKEITEWYNQWPEFPPEMRETFQEYAHHMEKLALKLMELIAMSLGLPPKQFHGFFKDQTSWIRLNYYPPCPNPDLVLGCGRHKDSGALTVLAQDEVPGLEVRRKSDGEWVLVKPLPDAYIINVGDVIQVWCNDAYESVEHRVMLSADKARLSYPFFLFPAHYTNVQPLEELTDEQNPPKYRPYNWGKFLATRKRSNFMKLDVENIQIHHFRINN* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3380 356 PRINTS Isopenicillin N synthase signature 289 307 - -
Lja2g3380 356 PRINTS Isopenicillin N synthase signature 224 245 - -
Lja2g3380 356 PRINTS Isopenicillin N synthase signature 56 73 - -
Lja2g3380 356 SUPERFAMILY Clavaminate synthase-like 3 337 - -
Lja2g3380 356 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 345 - -
Lja2g3380 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 301 IPR005123 -
Lja2g3380 356 Gene3D - 1 339 IPR027443 -
Lja2g3380 356 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 345 - -
Lja2g3380 356 Pfam 2OG-Fe(II) oxygenase superfamily 203 301 IPR044861 -
Lja2g3380 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 155 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3380 Lja-Chr2 77224226 77231684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3380 2 323 Glycosyltransferase AT5G59530 34.513 1.18e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3380 - - qsu:112029575 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3380 2 77224226 77231684 Lja2g3380 2 77224226 77231684 ECH