Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3378 ATGAGCGCCACCACTTTCAGTCCAATTTGTTTTGACAGAGGCCATTGTTGGAACAAGGACTTGAGAAAGCAACAGCGTGTTGTTAAGTGTTCGATCAAGAGTGGACACGCAACTTCACAAAAGACTGTTCGTGTTGGTGTTCTTGGAGCTAGTGGCTACACTGGTGCTGAGGTTCTTCGGCTTTTGGCAAATCATCCGGAATTTGGAGTTGCATTGCTGACTGCTGATAGGAAAGCTGGGCAGTCGATCTCATCTGTATTCCCTCATTTGGGCCCACAAGACTTGCCAGATTTGATTGCAATAAAGGATGCTAATTTTTCTGATGTCGATGCTGTGTTCTGTTGTTTGCCACATGGAACCACTCAGGATATAATTAAAGGCCTTCCAAAGCACTTGAAGATGGTTGATCTTTCTGCAGATTTTCGTCTAAGAGATATTTCTGAGTACGAAGAGTGGTATGGTCAGCCACACAAGGCACCGGATTTGCAGAAAGAAGCTATATATGGACTGACAGAGGTTTCAAGGGAGGAAGTAAAGAGTGCACGTCTAGTTGCTAATCCTGGTTGTTATCCAACTTCCGTTCAACTTCCTCTTGTCCCACTGATAAAGGCTAGTCTTATTCAGACTAGTAATATTATTATTGATGCTAAGTCTGGTGTGAGTGGAGCAGGGCGTAGTGCCAAAGAAAATTTGTTGTTCACTGAAGTCACTGAGGGGATGAACTCTTATGGTGTTACCCGGCATCGCCATGCTCCAGAAATTGAACAGGGACTCACTGATGCTGCGCGCTCAAAAGTAACTGTTAGTTTTACCCCACACCTGATTCCAATGAGCCGTGGTATGCAATCGACTATTTATGTAGAAATGGCTCCAGGAGTAAGAATTGAGGACTTGTACGAGCAACTGAAGCTCTCATACGAGGATGAAAAATTTGTAGTACTGTTGGAAAAGGGCGTTATTCCTCGAACTCATAGTGTTAAAGGAAGTAACTACTGTTTAATCAATGTTTTTCCAGACCGAATTCCTGGTAGAGCGATTATTATATCTGTGATTGATAACTTAGTGAAGGGAGCTTCAGGTCAGGCTTTACAAAACCTTAATTTGATAATGGGATTTCCAGAAGATCTGGGGCTTCATTACCTGCCCCTGTTTCCTTAG 1158 0.4326 MSATTFSPICFDRGHCWNKDLRKQQRVVKCSIKSGHATSQKTVRVGVLGASGYTGAEVLRLLANHPEFGVALLTADRKAGQSISSVFPHLGPQDLPDLIAIKDANFSDVDAVFCCLPHGTTQDIIKGLPKHLKMVDLSADFRLRDISEYEEWYGQPHKAPDLQKEAIYGLTEVSREEVKSARLVANPGCYPTSVQLPLVPLIKASLIQTSNIIIDAKSGVSGAGRSAKENLLFTEVTEGMNSYGVTRHRHAPEIEQGLTDAARSKVTVSFTPHLIPMSRGMQSTIYVEMAPGVRIEDLYEQLKLSYEDEKFVVLLEKGVIPRTHSVKGSNYCLINVFPDRIPGRAIIISVIDNLVKGASGQALQNLNLIMGFPEDLGLHYLPLFP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3378 385 Pfam Semialdehyde dehydrogenase, NAD binding domain 44 180 IPR000534 GO:0016620|GO:0051287
Lja2g3378 385 Gene3D Dihydrodipicolinate Reductase; domain 2 187 353 - -
Lja2g3378 385 Pfam Semialdehyde dehydrogenase, dimerisation domain 198 356 IPR012280 GO:0008652|GO:0016620|GO:0046983
Lja2g3378 385 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 184 200 IPR023013 GO:0003942
Lja2g3378 385 SMART Semialdhyde_dh_3 44 181 IPR000534 GO:0016620|GO:0051287
Lja2g3378 385 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 43 379 IPR000706 GO:0003942|GO:0006526
Lja2g3378 385 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED 1 385 - -
Lja2g3378 385 Gene3D - 44 371 - -
Lja2g3378 385 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 1 385 - -
Lja2g3378 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 215 IPR036291 -
Lja2g3378 385 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 189 353 - -
Lja2g3378 385 TIGRFAM argC: N-acetyl-gamma-glutamyl-phosphate reductase 43 385 IPR000706 GO:0003942|GO:0006526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3378 K00145 - gmx:100801527 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3378 2 77155957 77176196 Lja2g3378 2 77155957 77176196 ECH