Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3373 ATGGCTCCACCACCGCGCACGATCTCGCAAGAAGCATTCGATGAGATGGTGAAGGAGAACATCGACGACCTCGACATGGAACCCGCCGAGGCTCTTCAAGACGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCCGGTATCGTCACCTGCGTTCCGGGAGAGAGCAACCCGGTGATCGAATGCTTGGAGAGGTTGAAGCGGTTAGATTCTGAACCGGTGGTGGTGGATTTGGATGGAGTTGTTCAAGTGTTTGATCAGATTAAGGACTTGTGTGCCGCTGAGATTGCCAATGCGGCGATTGCCACCAAGAATGGTGCTGTGGAATTGGCTTGTTCTCTTTGCTCCAAGATAGCTGGATCTGACGCTGCTTTGCTTTCCGCTTTCAATGCCATTGCATCGATGCTTCGCGATGTTCAAAGTACTGGAGCATTTCAGAGAAGTAATGGACCTAGGATTATAGTTGATATCTTAAATGATAACAAGCAAAAGATAGACATCCTAGACAGTGGCTTTCATGTTGTGGCTTCAGCTGCAACTGGTGATGAGATTGTCAAGGAGTCATTCATGGAGTTGAAAGTTGATGAGTTAGTTATGGAGATAATGTCCATACATAAGAACACTGGAATTCAAAATGTATATGATGCTATTCGTGCTCTTTTAACACCTGACGACAATAGAGTTGTTGCTTCGCAAGTATATGGTTATGCACGGAAATTTTCTAAGATTGGGATTGCAGATGCCATTGTGGATTCTCTGCGAGCAGGACTTAGCTCCCCTCACCTAGTATCAGCATGCATCACCTTAAAGGCCATTGCTGTAAATGATGAAATATGTAAATCCATTGCTGATAAAGGTGGTATTGATTCAGTGCTCAGATGTATAGATGACAGTGGTGAACAAGGCAACAAAGCTGTGGCCAAAGTTTGTTGCTCATTACTTTCAAATTTAGCAGGAAGCGACGCAAACAAGAATGCAATCGTTGGAAAGGGGGGTATGGATAAGCTTATCAAACTTTCTGCCAGATGTGCTGATGACCCTTCTGTTTTGCAAGAGGTTATGTCTATCATTTCTGTGCTTTCATTAAGATCCCCAGAAAATGCAGCTCGTGCCATTGAAGCTGGTGCTGGTGACCTTGCTATTCAAGCCATGGAGAAATTTCCTGCAGCACACCAAATGCAAAGAAGCTCCTGTCTTATGATCAGAAACCTAGTAGTCAGAAATCCAGAGAACAGAACTATATTGCTTAAAAATGGAATTGAGAAATACATAAGGAAGGCAAAGCAAACACATGGAAACTGTAAGGATGCTGCTACAGATGCACTGAGGGATTTGGGGCTTGATAATTACAACTTGTAG 1362 0.442 MAPPPRTISQEAFDEMVKENIDDLDMEPAEALQDAIQTLTLQGVDLSGIVTCVPGESNPVIECLERLKRLDSEPVVVDLDGVVQVFDQIKDLCAAEIANAAIATKNGAVELACSLCSKIAGSDAALLSAFNAIASMLRDVQSTGAFQRSNGPRIIVDILNDNKQKIDILDSGFHVVASAATGDEIVKESFMELKVDELVMEIMSIHKNTGIQNVYDAIRALLTPDDNRVVASQVYGYARKFSKIGIADAIVDSLRAGLSSPHLVSACITLKAIAVNDEICKSIADKGGIDSVLRCIDDSGEQGNKAVAKVCCSLLSNLAGSDANKNAIVGKGGMDKLIKLSARCADDPSVLQEVMSIISVLSLRSPENAARAIEAGAGDLAIQAMEKFPAAHQMQRSSCLMIRNLVVRNPENRTILLKNGIEKYIRKAKQTHGNCKDAATDALRDLGLDNYNL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3373 453 PANTHER UNCHARACTERIZED 6 447 - -
Lja2g3373 453 SUPERFAMILY ARM repeat 74 432 IPR016024 -
Lja2g3373 453 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 287 333 IPR000225 GO:0005515
Lja2g3373 453 Gene3D - 59 453 IPR011989 -
Lja2g3373 453 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 6 6 447 IPR040104 -
Lja2g3373 453 SMART arm_5 365 407 IPR000225 GO:0005515
Lja2g3373 453 SMART arm_5 321 363 IPR000225 GO:0005515
Lja2g3373 453 SMART arm_5 276 320 IPR000225 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3373 K24166 - gmx:100527792 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3373 2 77057199 77070349 Lja2g3373 2 77057199 77070349 ECH