LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g3301	ATGGCGGAGGTTTCCGGCGACGGCGGAGGAGTGCCGACGCCGGCGCCGCTTTCGGTGTCGGGATCGTTCAGGGAAGGGAGAAGCGGCTCGTCGCGTAGGCGCGGCGGAGCGAGGCCGCCCAGTATGGATGCCGACGAGTTCATGAACCTGCTGCACGGTTCGGATCCGGTGAAGGTGGAGCTCAATCGCCTCGAGAATGAAGTTCGAGATAAGGACAGGGAATTATCAGAAGCACAGGCTGAGATCAAAGCCCTGAGACACTCTGAACGACTCAGAGAAAAGGCCGTTGAAGAGTTAACTGAAGAATTGTCAAAGGTTGAAGGGAAGCTAAAGTTAACGGAATCTCATCTAGAAAGCAAAAATCTTGAAATAAAGAAAATCAACGATGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCTGAAGCTACTCTTCGAAGGGTCCATGCTGCTCAGAAGGATGATGACATGCCTCCTATAGAAGCAATTCTTGCTCCTTTGGAGGCTGAACTCAAGCTTGCTCGGCAAGAGATTGCTAAACTACAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCTGCACTACTTGAAGCTGAGAAGACTGTTCAGGTTGCCTTGGCTAAGGCCTCCATGGTAGATGACCTCCAAAACAAAAATCAAGAGCTAATGAAACAGATTGAGATTTGCCAGGAAGAAAATAAAATTTTGGACAAAATGCATAGACTAAAGGTGGCAGAGGTTGAAAAGCTCACCCAAACTGTAAGAGAGCTGGAAGAGACTGTCCTTGCAGGTGGGGCAGCTGCTAATGCAGTGAGAGATTATCAGCGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTTGACAGGGAGTTGGCCCGTGCCAAGGTAACCGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAATGGAAAGATGCTAATGATAAAGTGATGCCTGTCAAACAATGGCTTGAAGAACGTCGATTCTTGCAGGGGGAAATGCAGCAACTTCGTGACAAGCTTGCTATAGTTGAGCGCACTGCAAAGTCTGAAGCGCAGTTGAAAGAAAAATATCAATTACGACTTAAAGTACTGGAGGACGGTTTGAGGGGAAATTCGAACGGCAGTAATCGTAGCACCTCAGAGGGAAGAAGTGCGAGCAATGGCCCTTCTCGTCGGCAATCTTTTGGTGGAGCTGATAACTTCTCAAAACCAACCTCTAATGGGTTCTTGTCTAAGAGAACACCATCATTTCAACTGAGGTCATCCCTATCCTCTAGCACAGTTTTAAAGCATGCTAAAGGAACATCTAAGTCTTTTGATGGTGGTTCAAGGACACTGGAAAGGAGTAAAATTCTGCTGAATGGAACGCCTCCAAGTTACTCATTTAATCAATCTCTTGAGGAAAACAAAGAGAGAGAGGCAGATGATAATTGGAAAGGAAGTTCGAATGATAAACCAAATGACTTACCAACGGTGGAGGATAGTGTTCCGGGTGTTTTGTATGACCTGCTTCAGAAGGAGGTCATAGCCTTGAGGAAAGCTGGTCACGAGAAAGATCAAAGCCTAAAAGATAAAGACGATGCTATTGAGATGTTAGCTAAGAAGGTAGATACATTGACCAAAGCCATGGAAGTTGAGGCAAAGAAGATGAGAAGGGAAGTAGCCTCCATGGAAAAGGAGGTAGCTGCTATGCGTGTGGATAAAGAACAAGAGAACAGAGCAAAGCGATTCAGCAGTGTAAAGGGGCCTGTAAACAGTGCTCAGCATCAGCTAATTTCTGGAAGGAATGTGACGCGGGGAGGATTAACACGCAGCACCCAATAA	1839	0.4584	MAEVSGDGGGVPTPAPLSVSGSFREGRSGSSRRRGGARPPSMDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRHSERLREKAVEELTEELSKVEGKLKLTESHLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAEKTVQVALAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRLKVAEVEKLTQTVRELEETVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIVERTAKSEAQLKEKYQLRLKVLEDGLRGNSNGSNRSTSEGRSASNGPSRRQSFGGADNFSKPTSNGFLSKRTPSFQLRSSLSSSTVLKHAKGTSKSFDGGSRTLERSKILLNGTPPSYSFNQSLEENKEREADDNWKGSSNDKPNDLPTVEDSVPGVLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRVDKEQENRAKRFSSVKGPVNSAQHQLISGRNVTRGGLTRSTQ*	613

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g3301	612	MobiDBLite	consensus disorder prediction	454	470	-	-
	Lja2g3301	612	MobiDBLite	consensus disorder prediction	1	48	-	-
	Lja2g3301	612	Coils	Coil	324	358	-	-
	Lja2g3301	612	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN 70-1	1	612	-	-
	Lja2g3301	612	MobiDBLite	consensus disorder prediction	372	498	-	-
	Lja2g3301	612	MobiDBLite	consensus disorder prediction	374	447	-	-
	Lja2g3301	612	MobiDBLite	consensus disorder prediction	584	612	-	-
	Lja2g3301	612	Coils	Coil	216	264	-	-
	Lja2g3301	612	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN 70-2	1	612	IPR009768	GO:0007010\|GO:0008017
	Lja2g3301	612	Coils	Coil	275	302	-	-
	Lja2g3301	612	MobiDBLite	consensus disorder prediction	569	612	-	-
	Lja2g3301	612	Coils	Coil	164	191	-	-
	Lja2g3301	612	Coils	Coil	545	579	-	-
	Lja2g3301	612	Coils	Coil	61	88	-	-
	Lja2g3301	612	Pfam	Microtubule-associated protein 70	45	593	IPR009768	GO:0007010\|GO:0008017
	Lja2g3301	612	Coils	Coil	96	130	-	-
	Lja2g3301	612	MobiDBLite	consensus disorder prediction	471	487	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja2g3301	Lja-Chr2	74594082	74603364	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g3301	-		-	gmx:100800667	1006.51

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja2g3301	2	74594082	74603364	Lja2g3301	2	74594082	74603364	ECH