Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3258 ATGGAAAGAGGAGCAGAGAAGGAGTTAGATAGAAGGAGCAAGTTTCTACACAGTTTGATACAGAACAAGAAGAAAACCAACACAGAACAACATGATGATGGTGATGATAGCACTAGCAGCAGCCTCAACAGGAGCAACGTTCATGTCAGAGCTTGTGATATGCCTCTCCCTTTGCAGAATCATGCTTTCCAATGCGCGCGTCAACACCTCGATTCTATGCCTGCCAAGAAGCTTGGCAGTAAACTTCTGGCACTGGCACTTAAGAAGGAATTTGATTCTTCATATGGTCCTGCTTGGCACTGCATTGTGGGTACTAGCTTTGGTTCCTATGTCACACATTCTGTTGGTGGGTTTTTGTACTTTTCCATTGATAAGGTTTTTATCCTTCTCTTCAAGACAGCTGTTCAACCATTGAACCATTGA 423 0.435 MERGAEKELDRRSKFLHSLIQNKKKTNTEQHDDGDDSTSSSLNRSNVHVRACDMPLPLQNHAFQCARQHLDSMPAKKLGSKLLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAVQPLNH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3258 140 PANTHER DYNEIN LIGHT CHAIN 4 139 IPR001372 GO:0007017|GO:0030286
Lja2g3258 140 SUPERFAMILY DLC 45 133 IPR037177 GO:0007017|GO:0030286
Lja2g3258 140 Pfam Dynein light chain type 1 47 133 IPR001372 GO:0007017|GO:0030286
Lja2g3258 140 MobiDBLite consensus disorder prediction 21 42 - -
Lja2g3258 140 PANTHER DYNEIN LIGHT CHAIN 4 139 - -
Lja2g3258 140 MobiDBLite consensus disorder prediction 24 38 - -
Lja2g3258 140 SMART Dynein_light_2 42 133 IPR001372 GO:0007017|GO:0030286
Lja2g3258 140 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 35 134 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3258 Lja-Chr2 72052057 72056522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3258 K10418 - gmx:100808023 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3258 2 72052057 72056522 Lja2g3258 2 72052057 72056522 ECH