Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2902 ATGGTTTCAGGGAATAACCCAGTGGACTCTTTCTTCAATCCAATCAGTGAAGTACTTTTGCCACTAGAAGTGGGGATTAGAAAGGCAGCAAAGGATCTTCAACATTGCTGGGATGGGACTATGAACAAGGGGAAAAGGGCTCAGTTGGTTGCATTTGCACATGAGAATGAAGGAGGCAAGTTTGAGATCTGTGGTGTGAAGAAGGGTGATGAAGAGAGGAAGAAAAGGTTGCCATTGCCAACAAAGGTATATTTGAAGGCTTTCTTGGGTATGTTTTCACAGCATTCAGGAAATTTGAGTGGGGGTGAAGTGTTGGGTAGAAGATTGAAGGAGAAGGAGGTCACAGCTAAGGAAGATGGTTCTTGTGAAAATTGCTTGCAGTTTGCTATTGATTGGTCTTTGCTGGCTAATGGGTTTCTTCAGGCTTTGCCAGCTACCTTGAAATCTGGGGGAAGTAGATTTAAGAAAATGGGTGATGAAGATAAATTGGGTTCTTTCATGAAATACACTGCATCTTGTGAAGTGAAGCTAAATGGATCAAAGGGTCAGATTGTTGGAACTATTGGAGAAAAGGGTGCAAGGGAGGAGGGAAAGCAAGTTTCCCCTGAACGCGTGATAGGTTTTATCTTTGATCAGCTTTCTCAGACTTTTCAGGGTCTTCATCAGGGAGTTCAAGTTAATATATTGCAAGGTCACAAAGTAGATTTGAATGGAATCTTGCTGAATTTGAGATTTGCCAAGGTTGGTGGTGTACCATCAAATGTACTTGGACTAAATCCTTCAACAAAAGAAGAGGGAGATGGCAGTGTGACTATTGAAAGCTGGGAAGACACTTGGGGAAGTTCACCTCAGAAGCTTCTAGCGCAGATAGGGCAAGCAGAGAAGGGGCATCCTGACAAGCAAAACCTTTTCTCAGTACAAGATTTCTTCACATACACAGAAGCTGAAGGGAGGAGGTTCTTTGAGGAGCTAGATAGAGATGGTGATGGCCAAGTAACTTTGGAAGATCTAAAAATTGCAATGAGAAAGAGAAAACTGCCACAAAAATATGCTCATGAATTTATGAAATGTACTAGAAATCACTTGTTTTCAAAATCTTTCAGTTGGAAACGATTCTTTACATTAATGGAACAGAAGGAGCCAGCAATTCTTCGTGCATATACATCTCTATGTCTTAGCAAGTCTGGGACATTGACCAAGAGTGAAATAATGGAATCATTAACGAATGCTAGACTTCCAGCAAATGAAGACAATGCAGTGGCTATGATGCAATTTCTGAATGCAGACATTGAAGGATCTGTTTCTTACGGACATTTTCGCAATTTCATGATTCTGCTTCCCTCTGATCGTCTTCAAGAGGACCCAAGGAGTGTTTGGTTTGAAGCTGCTACTGTGGGTGCCATTCCACCAACTGTTAAAGCTCCTGCTGGCAGTGTTCTAAGATCTGCATTGGCAGGTGGCCTTTCTTGTTCCTTTTCTTGTGCTGTAATGCATCCACTTGATACAATCAAGACCCAAGTACAAGCATCAACTCTGTCCCTTCCTGAAATTATTTCCAAGATTCCACAGATAGGGGCACGGGGTTTATACAAGGGGTCAATCCCTGCAATTCTTGGACAATTTTCAAGCCATGCCTTACGAACTGGGATATTTGAAGCTAGTAAATTGGTGTTGATAAATGTTGCTCCTACACTACCAGCAATCCAGGTGCAACCTATGCTATCATTCTATAGTACAATTTTGGGAACCGTAATGCGGATCCCCTGTGAGGTGCTAAAGCAGCGGTTGCAGGCAGGTCTCTATGATAATGTGGCTGAGGCTTTAGTTGGGACCTGGCGTAAGGATGGACTTGGGGGTTTCTTTCGAGGAACTGGGACTACCCTTTGTCGTGAGGTTCCATTTTATGTTGCTGGTATGGGTCTATATGACGAATCTAAAAAGGTTGTCCAACGACTACTCCGGCGGGAACTGGAGCCCTGGGAGATAGTTGTTGTGGGAGCAATATCCGGTGGCTTGGCTTCTGTCACCACAACGCCTTTTGATGTCATCAAAACCAGAATGATGACTACACAAGGCCAGTCTGTGTCAATGACCATAGTAGCCTTATCTATACTCCATCACGAGGGACCGCTCGGCTTGTTTAAAGGTGCAGTTCCCAGGTTCTTTTCAATTGCTCCTCTAGGTGCCATGAACTTTGCAGGTTATGAGCTAGTAAGGAAGGCCCTGAATAAAAATGAGGAGTAA 2244 0.4336 MVSGNNPVDSFFNPISEVLLPLEVGIRKAAKDLQHCWDGTMNKGKRAQLVAFAHENEGGKFEICGVKKGDEERKKRLPLPTKVYLKAFLGMFSQHSGNLSGGEVLGRRLKEKEVTAKEDGSCENCLQFAIDWSLLANGFLQALPATLKSGGSRFKKMGDEDKLGSFMKYTASCEVKLNGSKGQIVGTIGEKGAREEGKQVSPERVIGFIFDQLSQTFQGLHQGVQVNILQGHKVDLNGILLNLRFAKVGGVPSNVLGLNPSTKEEGDGSVTIESWEDTWGSSPQKLLAQIGQAEKGHPDKQNLFSVQDFFTYTEAEGRRFFEELDRDGDGQVTLEDLKIAMRKRKLPQKYAHEFMKCTRNHLFSKSFSWKRFFTLMEQKEPAILRAYTSLCLSKSGTLTKSEIMESLTNARLPANEDNAVAMMQFLNADIEGSVSYGHFRNFMILLPSDRLQEDPRSVWFEAATVGAIPPTVKAPAGSVLRSALAGGLSCSFSCAVMHPLDTIKTQVQASTLSLPEIISKIPQIGARGLYKGSIPAILGQFSSHALRTGIFEASKLVLINVAPTLPAIQVQPMLSFYSTILGTVMRIPCEVLKQRLQAGLYDNVAEALVGTWRKDGLGGFFRGTGTTLCREVPFYVAGMGLYDESKKVVQRLLRRELEPWEIVVVGAISGGLASVTTTPFDVIKTRMMTTQGQSVSMTIVALSILHHEGPLGLFKGAVPRFFSIAPLGAMNFAGYELVRKALNKNEE* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2902 747 Gene3D - 257 382 - -
Lja2g2902 747 ProSiteProfiles Solute carrier (Solcar) repeat profile. 657 741 IPR018108 -
Lja2g2902 747 ProSiteProfiles Solute carrier (Solcar) repeat profile. 566 648 IPR018108 -
Lja2g2902 747 Gene3D Mitochondrial carrier domain 482 747 IPR023395 -
Lja2g2902 747 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 147 290 - -
Lja2g2902 747 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 289 745 - -
Lja2g2902 747 SMART efh_1 316 344 IPR002048 GO:0005509
Lja2g2902 747 ProSitePatterns EF-hand calcium-binding domain. 325 337 IPR018247 -
Lja2g2902 747 SUPERFAMILY EF-hand 317 446 IPR011992 -
Lja2g2902 747 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 147 290 - -
Lja2g2902 747 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 289 745 - -
Lja2g2902 747 SUPERFAMILY Mitochondrial carrier 478 738 IPR023395 -
Lja2g2902 747 ProSiteProfiles Solute carrier (Solcar) repeat profile. 477 557 IPR018108 -
Lja2g2902 747 Pfam Mitochondrial carrier protein 657 745 IPR018108 -
Lja2g2902 747 Pfam Mitochondrial carrier protein 478 558 IPR018108 -
Lja2g2902 747 Pfam Mitochondrial carrier protein 576 650 IPR018108 -
Lja2g2902 747 Gene3D - 394 465 - -
Lja2g2902 747 Pfam EF-hand domain 318 343 IPR002048 GO:0005509
Lja2g2902 747 ProSiteProfiles EF-hand calcium-binding domain profile. 312 347 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2902 Lja-Chr2 48434181 48445840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2902 1 747 EF-hand Containing Proteins AT2G35800 53.799 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2902 - - lang:109360819 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2902 2 48434181 48445840 Lja2g2902 2 48434181 48445840 ECH