LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g2868	ATGGCAACTACGATGTCAGCAGAGAAGATGAGAACATTGGAAACAACCCTGTTTTCAGGCACTTACATTCAACCAACTTGTTTCACCACTTCCGTTTCCTACAAATCTCGAAGAACCCCAATTGCACTGACCTTAACCACCAACACACAGCCACGACCAAAGGGAAAGCCACTGGGTTGGTCACTGGAACAAACACTTGGTGCGCAATCTCTGCCTGAGAAGAAAACTGGGAAGAAAAGGGTCTTCTTTTTAGATGTTAATCCTCTCTGTTATGAAGGAAGTAAGCCCAGCATGCACTCTTTTGGTAGATGGCTCTCTCTTTTTCTCTCTCAAGTAACTAACAACGACCCTGTCATTGCGGTTATTGATGGAGAAAGGGGCAGTGAGCATCGCAGAAAGCTGCTACCCTCTTATAAGGCACATAGGAAAAAGTTCACGAGACACCTATCTTCTATGCAAAGATTTTCAAGTGGTCATGTGGGGAGGTTCAATCAAGTCATAAATGATGTCCTTGGAAGGTGCAACATACCAGTTATAAAAATTGATGGCCATGAAGCTGATGATGTTGTAGCTACACTTGCTGGACAAGTTCTCAATAAAGGGTTTCGAGTGGTGATTGCCTCCCCTGATAAGGATTTTAAACAACTTATTTCTGAAGATGTGCAAATGGTTATGCCTTTGCCAGATTTACAGAGATGGTCCTTCTACACCCTGAGGCACTACAGAGACCAGTACAATTGTGATCCCCAGTCTGATCTCAGCCTTAGATGTATAGTAGGTGATGAAGTTGATGGCGTTCCTGGCATCCAACATGTGGTCCCTAGTTTCGGCCGGAAGACTGCTCTAAAACTTATTAAAAAGCACGGTTCACTGGAAACTTTATTGAGTGCTGCTGAAGTAAGGACTGTGGGCAGACCATATGCACAGGATGCCCTTACAAAGTATGCTGATTACCTACGGAGAAACTATGAAGTTCTTGCCTTGAAGATGGATGTAAATGTCCAACTTTATGAAGAGTGGTTGGTGGAGAGAGACACTCAAAACGATGCAATTGCACTATCTACCTTCTTTAAATATTTGGAAGAAAGTAAGGAGCTCACCTACAATAACAGACCTAACCTTTATAATGGTTGA	1134	0.4303	MATTMSAEKMRTLETTLFSGTYIQPTCFTTSVSYKSRRTPIALTLTTNTQPRPKGKPLGWSLEQTLGAQSLPEKKTGKKRVFFLDVNPLCYEGSKPSMHSFGRWLSLFLSQVTNNDPVIAVIDGERGSEHRRKLLPSYKAHRKKFTRHLSSMQRFSSGHVGRFNQVINDVLGRCNIPVIKIDGHEADDVVATLAGQVLNKGFRVVIASPDKDFKQLISEDVQMVMPLPDLQRWSFYTLRHYRDQYNCDPQSDLSLRCIVGDEVDGVPGIQHVVPSFGRKTALKLIKKHGSLETLLSAAEVRTVGRPYAQDALTKYADYLRRNYEVLALKMDVNVQLYEEWLVERDTQNDAIALSTFFKYLEESKELTYNNRPNLYNG*	378

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g2868	377	PANTHER	5'-3' EXONUCLEASE FAMILY PROTEIN	32	365	-	-
	Lja2g2868	377	SUPERFAMILY	5' to 3' exonuclease, C-terminal subdomain	253	347	IPR036279	-
	Lja2g2868	377	Gene3D	-	246	326	-	-
	Lja2g2868	377	SMART	53exo3	79	344	IPR002421	GO:0003677
	Lja2g2868	377	Pfam	5'-3' exonuclease, N-terminal resolvase-like domain	101	225	IPR020046	GO:0003677
	Lja2g2868	377	PANTHER	DNA POLYMERASE I	32	365	IPR002298	GO:0003887\|GO:0006261
	Lja2g2868	377	CDD	PIN_53EXO	116	226	-	-
	Lja2g2868	377	Gene3D	-	91	245	-	-
	Lja2g2868	377	SUPERFAMILY	PIN domain-like	79	245	IPR029060	-
	Lja2g2868	377	Pfam	5'-3' exonuclease, C-terminal SAM fold	253	337	IPR020045	GO:0003677\|GO:0003824

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g2868	-		-	gmx:100797174	577.015

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja2g2868	2	47023874	47043378	Lja2g2868	2	47023874	47043378	ECH