Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2866 ATGGCATCAGAGAAGAATCCAGAAGAGGAAGAAGGGAAAATCCCAGTGCTCACAGTGCTAAAGAACGAATCAATTCTCAAGAACATTTTCATCGTCAACAAGCCGCCGGAAGATCATTCTCCTCGCCGCCGCCATCGTGACCATGAAGACATCCTCCTCGTCGGTCGACACCCCGATTGCGACCTCATGCTCACACACCCTAGCATCAGCCGCTACCACCTCCACATTCGCTCTGTCCCCTCTTCGCTCTCGTTCTCCGTCATCGATCTCTCTTCTGTGCACGGAACGTGGGTTTCCGGGAGGAAGATTGAGGCAGGGGTGAGGGTGGAGATGAAGGAAGGTGACACGCTGAGAATTGGGGTTTCCAGTAGGGTTTATCGATTGCATTGGATTCCGATTAGCCGCGCTTACGATTTGGAAAACCCCTTTGTGCCTGAGATGCATGCCCTTGTGCAACAAGGAGAAGAAGAAGAAGATGATGATGATGATGATGATGAAGAACAAGTCGAAGAAGAGATAGAGCAGGAGTTGAATAGTTGTCCAGTTGAAATGAAAGGCAGGTATTCAGTGGATTCAATTCTTGAGTCTATCAATTCTTTATTTCTTGATGAGAATGTGGAACTAACTGTAAAAGAGGAGGAGATTTCGGCATCACCTCAGATGCTTGAAGACAATGTGTCTTCCTGTTGTCCAGATGACAAGGAAGAAATTCAATCAGTGGATTCAATTCTTGAGTGTCTCAAGGACGAGGTTTCGGCATCACCTCAGATGCTGAAAGACAATGCTACTTCCTGTTGTCCAGATGACAAGGAAGAAATTCAGTCAGTAGATTCAATTCTTGGATGTCTCAATACTTTATTCCTTGACAAGAATGTGGAAGTAACTGTCAAAGAGGAGATTCTAGCAGCACCTCAAATGCTGGAAGACAGTATTTCTTTGAGTCATGAAGGACAAGTGAAGAGGCAATCAAAGGATGAAGAATTTGGAGTCTCAAGTGAGCCTTATGGTAGTAAAGCAGCCTATTGGCCAACCTCTGATGTTGAAGACAAGCAGGTTGTTGTATGTGTTAACACAATGGCAACAAATTTGTCTGAGGGTGAATGTTTGTCAGTTGTAGAATCTGTTTCTGGGGCCAAAATGCTGCAAATCCAGTCTCCACAGGATACGTTTACTTCACCATTACCGCATCGTGTAGAGAATTCATTTGCAAAGCATCAGTCCAGCTTCCAGGTTCTATCCCCGGCTTATTTACCTGAATCAGTTGTTAGATGTGATAACACAATTGCAGAAAATCTGTATGAGGATGAATGTCTGCCGGTTCTGGAAGCTGTTTCTGGGACCAAAATGCTGCCAATCCAGTCTCCACAGGATACATTTACTTCATCATTACTGCCTCATACAGAGAACACATTTTCTGAAAAATTGGATCAGGATGATTGTTTGACTGTGCCGGAAGCTGTTTCTGGGACCGATATGCTGCAAATCAAGTCTCCACGCGATACATTTGCTACACAATTAACACCTCCTTTAGAGAACTCAGTTGAAAAGCATTGTTCCAGCTTCCGGGTTCAAACACCAACTTTTGTGGAATCATTTGTTGAAGGTGATAACACATTGGCAGAATATCTACTTGAGGATGAGAGTTTTCCTGTTCTGGAAGCTGTTCCATGGGATGAAATGCAGCAAATCCAGTCTCCACAAGATACATTAACTTTACCATTACCCCCTTGTGTAGAGGACTCATTTGAAAAGCATTGCTCCAGCATAAATTTAGATTCTGCATCTTTTGATGTTAAAATAGCAGCTGAGGCTGTATTAGCGAAAGAATCTGAATGTACAGCCAGAGATAATGGAAGGGCAATAGACACTTTGACTGTTGGTGCGGGAATTTTCAATTCTCAGAACATGTTTTTGCCAGTGGAAGAAGTTATCCCTGGTACCATATTTCAACAATCCAAATTTATTGAAGAAGTTGCTATGGATTCACAATCTGACGGAAAAAACCAAGATAGATGTGACCAATGGCACATACCACTTCAGAGAGAATCAGTGAATTTGCCAATGACCCAGGAGGATCTCTTGAATATTACAAATGAGACCCAGACCCCAAAACCTGATATGGAAACCCTTGAAAGCTGCAAAGAAACAATGGAGAAAAGTTCGAAAAATCAAAATATTTGGTCAAGGAGAGGCAAAGCTACTAATGCTCCTCTGATTCAAACAAGAAAGAGTGTACTTAAAGGTTCTAATGCTGACAATGAAGCTGCAATGAGCGATTGGAACAATATCATTAATAAAGCCATCTCGAAGGATCTTCTCTCTGTTCTGGATACGGAAGAAGAGATCTTTACTCCAGATAAAGAAAACTTCAGGCCGAATATGCTTCAGTTGCGGTTTCTTAAAAAGTCTGGTAAGCTAGAAGAAACTAAACATTCCAAGTCACAAAGTTCAAAGGATAAAACAATCTCAAAGGATCTTTTCTCTGTTTTGGATGGAGAAAAAGAAGAAGAAGAAATCTACACTCCAGATAAGGAAAACTTCAGCCCAAATACCCTACACCTGCGCCGAATGAAAAGGTTTGGTAAGCTAGAAGAAACTAAACATTCCAAATCACAAAGGTCATGCAGTTCAAAGGATAGAACAATCTCAAAGGATCTTTTCTCTGTTTTGGATGGGGAAAACGAAGAAGAAGTCTACACTCCAGATAAGGAAAACTTCAGCCCAAATACCCTGCACCTGCGGCGCATGAAAAAGAAGGGAAAGCTAGAAGAAATTAAACATTCCAAGTTTCGATGGTCACCAAATCCAAAGGGTAAATTTGGTCCCAACATATATTCAGATGAAAGCAGAAGCCCCACCTCAAACAAAGAGAATCAGACTCCAAAAAGAGTCCAAGATCAAAAGTTGCAGAAAAAGCCTTTTGGCACTCACATCAAACTGACTCAAGAGCATGATGTAAATGCATTGAAGAACAGAGTGGAAAGGGTACCCTTCCAATCACTAAAGATCTCAGGCACTTCTAGTCCTGTTTCTGCTGAAAAAAGCATTGATGTACGTGACTGTGAAGAAATTTCAGACAAGCATAATAACCCTTCTCAGGATACTAGTTTGGTGCAAAAGAGGAGCTGGGACATGATTGTGGACACCACTACTCTTATGAACAAAGAATCAAGGAAAGCTCTGCAGCTTTTACAAGGTCTCAAGGGGACTCGATTAATCGTGCCAAGATTGGTCATAAGGGAACTGCAAAGTATGAAGCAACAGAACTCATTTTTTAGAAGATTTAGAAGAATTTCAGAGGCTTCTTTGGCATTGGAATGGGTTGAAGAATGTATGGTGAACACAAACTGGTGGATTCATATCCAGAGCTCAGTGGATGAAGGAAGACGGATTGCTCCAACCCCACCTGCTTCTCCGCAGACTCAAATTTGTGAAGAGAGTTGGAGTTTTCATGGTGGGATTGGGAGCTTCATGGAGATTCCATCACCAACAATAGAAGATCACATCCTTGACTTTACTCTTCTACATAAAAGGAAGCAAATTGATGGACAACTTGTCCTTCTTAGTGAGGATGTCACTTTGAAAATCAATTGCATGGCAGAGGGGTTGCTATGTGAGCCAGTGCAGGAATTTCGTGAGAGTCTAGTGAATCCATTCTCTGAGAGGTTCTTGTGGAAAAACAGCTCTGCTCGAGGACAAACATGGTGTTGCGAGGACGATGTAGTTTTGAGGGAGAGATATTGTCGTTTGCCTCTGAGGAAGTCATCAAAGGGAGCTGCAAGCGGCTTGAAGCTCATTCTGCTCCACAATTCTCAATATGGCCACTGA 3828 0.4232 MASEKNPEEEEGKIPVLTVLKNESILKNIFIVNKPPEDHSPRRRHRDHEDILLVGRHPDCDLMLTHPSISRYHLHIRSVPSSLSFSVIDLSSVHGTWVSGRKIEAGVRVEMKEGDTLRIGVSSRVYRLHWIPISRAYDLENPFVPEMHALVQQGEEEEDDDDDDDEEQVEEEIEQELNSCPVEMKGRYSVDSILESINSLFLDENVELTVKEEEISASPQMLEDNVSSCCPDDKEEIQSVDSILECLKDEVSASPQMLKDNATSCCPDDKEEIQSVDSILGCLNTLFLDKNVEVTVKEEILAAPQMLEDSISLSHEGQVKRQSKDEEFGVSSEPYGSKAAYWPTSDVEDKQVVVCVNTMATNLSEGECLSVVESVSGAKMLQIQSPQDTFTSPLPHRVENSFAKHQSSFQVLSPAYLPESVVRCDNTIAENLYEDECLPVLEAVSGTKMLPIQSPQDTFTSSLLPHTENTFSEKLDQDDCLTVPEAVSGTDMLQIKSPRDTFATQLTPPLENSVEKHCSSFRVQTPTFVESFVEGDNTLAEYLLEDESFPVLEAVPWDEMQQIQSPQDTLTLPLPPCVEDSFEKHCSSINLDSASFDVKIAAEAVLAKESECTARDNGRAIDTLTVGAGIFNSQNMFLPVEEVIPGTIFQQSKFIEEVAMDSQSDGKNQDRCDQWHIPLQRESVNLPMTQEDLLNITNETQTPKPDMETLESCKETMEKSSKNQNIWSRRGKATNAPLIQTRKSVLKGSNADNEAAMSDWNNIINKAISKDLLSVLDTEEEIFTPDKENFRPNMLQLRFLKKSGKLEETKHSKSQSSKDKTISKDLFSVLDGEKEEEEIYTPDKENFSPNTLHLRRMKRFGKLEETKHSKSQRSCSSKDRTISKDLFSVLDGENEEEVYTPDKENFSPNTLHLRRMKKKGKLEEIKHSKFRWSPNPKGKFGPNIYSDESRSPTSNKENQTPKRVQDQKLQKKPFGTHIKLTQEHDVNALKNRVERVPFQSLKISGTSSPVSAEKSIDVRDCEEISDKHNNPSQDTSLVQKRSWDMIVDTTTLMNKESRKALQLLQGLKGTRLIVPRLVIRELQSMKQQNSFFRRFRRISEASLALEWVEECMVNTNWWIHIQSSVDEGRRIAPTPPASPQTQICEESWSFHGGIGSFMEIPSPTIEDHILDFTLLHKRKQIDGQLVLLSEDVTLKINCMAEGLLCEPVQEFRESLVNPFSERFLWKNSSARGQTWCCEDDVVLRERYCRLPLRKSSKGAASGLKLILLHNSQYGH* 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2866 1275 ProSiteProfiles Forkhead-associated (FHA) domain profile. 52 103 IPR000253 GO:0005515
Lja2g2866 1275 CDD FHA 15 128 IPR000253 GO:0005515
Lja2g2866 1275 Pfam FHA domain 53 120 IPR000253 GO:0005515
Lja2g2866 1275 MobiDBLite consensus disorder prediction 946 960 - -
Lja2g2866 1275 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 889 1274 - -
Lja2g2866 1275 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 4 820 - -
Lja2g2866 1275 Pfam PIN domain 1045 1206 IPR002716 -
Lja2g2866 1275 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 829 877 - -
Lja2g2866 1275 Gene3D - 2 133 - -
Lja2g2866 1275 MobiDBLite consensus disorder prediction 925 972 - -
Lja2g2866 1275 Gene3D - 1038 1215 - -
Lja2g2866 1275 MobiDBLite consensus disorder prediction 153 176 - -
Lja2g2866 1275 PANTHER TRANSMEMBRANE PROTEIN 18 829 877 - -
Lja2g2866 1275 PANTHER TRANSMEMBRANE PROTEIN 18 4 820 - -
Lja2g2866 1275 SUPERFAMILY SMAD/FHA domain 35 132 IPR008984 GO:0005515
Lja2g2866 1275 SMART FHA_2 51 103 IPR000253 GO:0005515
Lja2g2866 1275 PANTHER TRANSMEMBRANE PROTEIN 18 889 1274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2866 Lja-Chr2 47007854 47013757 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2866 - - lja:Lj2g3v0216900.1 2410.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2866 2 47007854 47013757 Lja2g2866 2 47007854 47013757 ECH