Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2863 ATGGGGTTCATCACCACCCTCATCTCCCGAGCCACCACCACCACCACCACGAACCCGCGCCTCCTGTCCCAGCGGCGAACCATATTCGACGGCACCTTCCAACTCGTCCGAGACCGAGGCCTCGACCACGCCGTAGAGAGGGAGAAGAATCTGAAGCCATTAATAGACCTCAAAAACCTCATCAAGCTCGAACCTTCCAAGTCCCTCCCAGCTTCCCTCATCAGAGACTCCATCGATCTCCCCTTCCGCCCCATCGAGTTCATCCGCAAGTACCCCACCGTCTTCGAAGAGTTTCTCGCCGGCGGCCTCCAACCCCACATCAAGCTCACACCGGAAGTGCTCGACCTCGACGCCGAGGAGCAGTTAACGTTCCACAGCGACATTGTCAAGCAACAAGCTGCGGATCGCCTTCTTAAGCTCTTGATGATTTCAAGGATCCATAAAATCCCCTTAGGAGTCATTGAACGCTTGAAATGGGACCTCGGTCTTCCCCATGATTATGTCGAAAGCGTTGTTCCTGAGTTCCCGGATTACTTCCGGGTGCGGGACGATGATGTTTTGGAGCTTGTTTGCTGGAGTGATGAGCTTGCTGTTTCGGTTTTGGAGAAGAAGTGTATGGGGAAGGGTAAGGAAGTGGCGTTTCCGGTGCAGTTTTCGAGCGGGTTTGAGATGGATAAGAAGTATGAGAAGTGGTTGAAAGAGTGGAACAAGTTGCCTTATGTGTCCCCGTATGAGAATGCGGCTCATCTTCCGGCTTCAAGTGATGAGTCTGATAGGTGGGTTGTTGGTGTTTTGCATGAGATTCTTCATGTTTTGGTTCCGAAGAAGACCGAGAGGGATAATGTGTTTGTGCTTGGGGAGTTGCTGGGTTTGAGGTCGAGGTTTAAGAGGGCACTTTTGCAGCATCCGGGTATCTTTTATCTGTCTAGTAAGATTGGGACCTATACAGTGGTTTTGAGGGAGGGTTATAAGAGGGGTTCGTTGATTGAGGATCATCCTGTGATGCAATTGAGGGGGAAGTATGTGCATCTCATGAATACTGTTAAGGAGGAAAGCAAAGAAGGTAAGGTGGCTCAGGGTAAAAGCAGCAAAAAAGAGGGCAATGTGGCCGGGCATGAACGGAAAGTAGGAGAGGAAGAGGGTGGTGATGAGCACAGTGGGGAGGAACAGAAAGGGGAGAGGTTTGAGGACGAAGTTGAGGATGCTAGTGAATCTGCCTTTGATGATGATAGTGATGATGATGAAGAGAAAGAAGAAGAGCGGTCTCCAAGAGGTAGTCATGGAATTGCTGGCAAAAGAAGGGGCAGAGACTCAGGGAAAGTGAATTTAAATGCTGATAAGCCTTTGAGAGAAGGTTGGGGAGAACGTTCATCTGGAAAGCCTTGGCAGAGGAATGTGGAGAGAAATAGGTCAGGAGTTTCAGAAAGAACACAAACACGAGGTGAATATAAAGATGTTGAGAGTTCGGCTTGGAAGCCTAGGCAGAAGACTGCGGAAAGAAATAGGTCAGGAGTTTCTGAAAGAACACAAATGCAAGGTGGATATAAAGATGTTGAGAATTCGGCTTGGAAACCTAGGCAGAGGACTGGCGAAAGAAATAGGTCAGGAGTTTCTGAAAGAACACAAATGCGAGGTGGATATAAAGATGTTGAGCATTCAGCTTGGAAGCCTAGGCAGAGGAGCGCGGAGAGAAATAGGTCAGGAGTTTCTGAAAGAACACAAACTCGAGGTGGATATAAAGATGTTGAAAATTCAGCTTGGAAGCCTAAGCAGAGGAGCGGGGAGAGAAATAGGTCAGGAACTTCTGAAAGAACACAAATGCAAGGTGGAAATAAAGATGTTGAGCATTCAGCTTGGAAGCCTAGGCAGAGGACCGGGGAGAGGAATAGGTCTGAAGTTTCTGAAAGAACACCAATCCGAGGTGGATATAAAGATGTTGAGAGTTCACAACAGAAACCAAGATCCTCTAAAGGCCCAGGAAGGCCATCAGCTAGCAAGAAAACCCCTGTTTTGTAA 2016 0.4851 MGFITTLISRATTTTTTNPRLLSQRRTIFDGTFQLVRDRGLDHAVEREKNLKPLIDLKNLIKLEPSKSLPASLIRDSIDLPFRPIEFIRKYPTVFEEFLAGGLQPHIKLTPEVLDLDAEEQLTFHSDIVKQQAADRLLKLLMISRIHKIPLGVIERLKWDLGLPHDYVESVVPEFPDYFRVRDDDVLELVCWSDELAVSVLEKKCMGKGKEVAFPVQFSSGFEMDKKYEKWLKEWNKLPYVSPYENAAHLPASSDESDRWVVGVLHEILHVLVPKKTERDNVFVLGELLGLRSRFKRALLQHPGIFYLSSKIGTYTVVLREGYKRGSLIEDHPVMQLRGKYVHLMNTVKEESKEGKVAQGKSSKKEGNVAGHERKVGEEEGGDEHSGEEQKGERFEDEVEDASESAFDDDSDDDEEKEEERSPRGSHGIAGKRRGRDSGKVNLNADKPLREGWGERSSGKPWQRNVERNRSGVSERTQTRGEYKDVESSAWKPRQKTAERNRSGVSERTQMQGGYKDVENSAWKPRQRTGERNRSGVSERTQMRGGYKDVEHSAWKPRQRSAERNRSGVSERTQTRGGYKDVENSAWKPKQRSGERNRSGTSERTQMQGGNKDVEHSAWKPRQRTGERNRSEVSERTPIRGGYKDVESSQQKPRSSKGPGRPSASKKTPVL* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2863 671 MobiDBLite consensus disorder prediction 399 417 - -
Lja2g2863 671 MobiDBLite consensus disorder prediction 648 662 - -
Lja2g2863 671 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 20 425 IPR045040 GO:0003723
Lja2g2863 671 MobiDBLite consensus disorder prediction 583 599 - -
Lja2g2863 671 MobiDBLite consensus disorder prediction 351 671 - -
Lja2g2863 671 MobiDBLite consensus disorder prediction 469 503 - -
Lja2g2863 671 MobiDBLite consensus disorder prediction 615 642 - -
Lja2g2863 671 MobiDBLite consensus disorder prediction 351 398 - -
Lja2g2863 671 MobiDBLite consensus disorder prediction 521 570 - -
Lja2g2863 671 PANTHER F14O23.23 PROTEIN 20 425 - -
Lja2g2863 671 MobiDBLite consensus disorder prediction 418 454 - -
Lja2g2863 671 Pfam Plant organelle RNA recognition domain 36 349 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2863 Lja-Chr2 46617745 46619794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2863 - - lja:Lj0g3v0141519.1 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2863 2 46617745 46619794 Lja2g2863 2 46617745 46619794 ECH