Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2862 ATGGGAGATCATTCAGAGCAGGACTACTTATCCAACAAATTCCCAACAACCTCTCAGGTTGTGGAAGAATTGAAGGAACTATGGAGCATGGCCTTACCAATCACAGCCATGAACTGGTTGGTCTTTGTGAGAGCAGTTGTTTCAGTCCTCTTCCTCGGAAGACTCGGAAGCTTGGAGCTAGCAGGTGGAGCACTCTCCATAGGCTTCACCAACATCACAGGCTACTCTGTCCTCGTGGGTCTCGCATCAGGTCTCGAACCTGTATGCTCTCAAGCATTCGGAAGCAAAAACTGGGAACTCCTCTCACTTTCTCTGCAGCGAATGGTTCTCATCCTCCTTGTCGCAACGCTCCCCATAAGCCTCCTCTGGCTGAATCTGGAGCGAATCATGCTTTTCATGGGTCAGGATAGTGGAATCACGCGAATGGCGGCGGTTTACTGTTTCTACTCTCTGCCTGACCTTTTGACTAACACGTTGCTGCAGCCGTTAAGGGTGTTTCTGCGGTCGCAGAAAGTGACGACGCCGATGATGTACTGTTCGTTTGTGGCGGTGGTGTTCCATGTGCCGTTGAATTATTTGTTTGTGGTGGTGATGGGGCTGGGGGTGCCGGGTGTGGCGGTGGCGTCGGTGATGACTAATATGAATATGGTGGTGCTGATGGCGGGGTATGTGGGGGTGTGGAGGAGGAAGGAGATGGTGTTGAGGTGGGGTTGGGGTGGTGGTGGTGGTGGTGGAGTGGGGGATTTTGGTGGTGTTGGGATGGGGCAGTTGATGAAGTTGGCTGTGCCTAGTTGTTTGATGATTTGTTTGGAGTGGTGGTGGTATGAGATTGTGACGGTGATGGCTGGGTACTTGGAGAATCCAACGCTGGCGGTTGCGGCTACTGGGATTTTGATTCAGACTACTAGCATGATGTACACTGTCCCCATGGCACTTGCTGGCTGTGTTTCTGCCAGGGTAGGGAATGAGCTTGGAGCTGGTAAACCATACAAGGCAAAGTTAGCAGCCATGGTTGCCTTAGGATGTGCTTTTGTGATGGGCTTCATCAATGTAACATGGACTGTGATCCTTGGACACAAGTGGGCTGGGCTGTTTACAAAAGATGAGCCTGTCAAAGCCTTGGTTGCATCAGTCATGCCACTTATGGGCCTGTGTGAGCTTGGAAACTGCCCACAAACCACAGGCTGTGGCATCCTTCGCGGGACGGCCAGGCCTGTGATAGGGGCCCACATCAACCTGGGCTCATTCTATTTCGTGGGCACCCCGGTTGCCGTGGGCTTGGCATTTTGGTTCAAGGTTGGGTTCAGCGGGCTCTGGTTCGGGCTTCTCTCTGCACAAGTGGCGTGTGCTGTGTCAATTCTCTATGTGGTTATAGTGCGTACAGATTGGGAAGCTGAGGCTTTGAAGGCTGAGAAGCTCACAAGGGTGGAGATGGGTAGTTACAATGGAAGTAGGATTAAAGAGAGTGAGAAAGAGGAAGAAAGCAAAGGGTTGTTGGTGAGTGGGAATGGGCACAAGAGTGACATTTGCTAA 1533 0.5179 MGDHSEQDYLSNKFPTTSQVVEELKELWSMALPITAMNWLVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLASGLEPVCSQAFGSKNWELLSLSLQRMVLILLVATLPISLLWLNLERIMLFMGQDSGITRMAAVYCFYSLPDLLTNTLLQPLRVFLRSQKVTTPMMYCSFVAVVFHVPLNYLFVVVMGLGVPGVAVASVMTNMNMVVLMAGYVGVWRRKEMVLRWGWGGGGGGGVGDFGGVGMGQLMKLAVPSCLMICLEWWWYEIVTVMAGYLENPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAMVALGCAFVMGFINVTWTVILGHKWAGLFTKDEPVKALVASVMPLMGLCELGNCPQTTGCGILRGTARPVIGAHINLGSFYFVGTPVAVGLAFWFKVGFSGLWFGLLSAQVACAVSILYVVIVRTDWEAEALKAEKLTRVEMGSYNGSRIKESEKEEESKGLLVSGNGHKSDIC* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2862 510 Pfam MatE 263 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g2862 510 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g2862 510 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 484 - -
Lja2g2862 510 MobiDBLite consensus disorder prediction 487 510 - -
Lja2g2862 510 CDD MATE_eukaryotic 23 469 IPR045069 GO:0042910|GO:1990961
Lja2g2862 510 TIGRFAM matE: MATE efflux family protein 33 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g2862 510 PANTHER PROTEIN DETOXIFICATION 13 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2862 Lja-Chr2 46567104 46572715 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2862 K03327 - gmx:100800364 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2862 2 46567104 46572715 Lja2g2862 2 46567104 46572715 ECH