Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2820 ATGGCCATAAAGACCTTTGAATTGCTGAAAAGCTGCGCATCCCATGAAGAGATTATGAAAGTTCTTTCATCTGTGGCTTCCGATTTGGGCGATGTGATCGATGATGTGAGTTCACTGCAGGTGAAACCCCTAAAAGGGGCAATGACCAATGAGGTTTTTGAGGTGAATTGGCCAACCAAGAGTGATGGTCATCTCAGAAGGGTTCTGGTTCGATTATATGGGGAAGGTGTTGAGGTTTTCTTCAACAGGGTGGATGAAATCCAAACCTTTGAGTGCATGTCAAAGCACGGTCAGGGTCCACGCCTTCTCGGCCGGTTCACCACCGGTCGGGTTGAGGAGTTCATTCATGCCAGAACACTCTCAGCTGCTGACCTCCACGACCCTGAAATATCCGCTATGATAGCATCTAAGATGAAGGAGTTTCACAATCTTCATATGCCTGGTGAAAAGAAGGCTCAGATTTGGCAGAGAATGAGGAACTGGCTTAATCATTCCAAGAGTCTGTGCTCCCCAAAGGATGTCAAGAATTTTGGCTTGGACAATATAGATGCTGAAATAAAGATGCTGGAAGAGCTGTTATGTAAAGGAGATGAAGAGATTGGTTTTTGTCACAATGACTTACAGTATGGTAACATAATGATAGATGAAGAGACAAGATCAATCACTTTAATTGACTACGAATATTCTAGCTACAATCCTGTTGCATATGACCTGGCAAATCACTTCTGTGAAATGGCAGCGAATTACCATAGTGACACCCCTCATGTTCTCGACTACAGTAAATATCCAGATCTGGAGGTGCGTCAAAGGTTTATTTGTATTTACTTGAGTTCAGAAGGTAAAGAGCCGAGCAACTCTGAAGTGGAGCAGCTAATGAGTGCTGCAGAAAAATACACTCTTGCAAACCATCTATTTTGGGGATTGTGGGGACTTATTTCGAGTTACGTAAATACAATTGACTTTGACTACAAGGAGTATGCAAGGCAGAGGTTTGAGCAATACTGGTTAAAGAAGCCTACTTTACTGGAATCACCAAGCATCAATATTTCCCAAGATGAATCTGTCAATGGATCTTAG 1077 0.428 MAIKTFELLKSCASHEEIMKVLSSVASDLGDVIDDVSSLQVKPLKGAMTNEVFEVNWPTKSDGHLRRVLVRLYGEGVEVFFNRVDEIQTFECMSKHGQGPRLLGRFTTGRVEEFIHARTLSAADLHDPEISAMIASKMKEFHNLHMPGEKKAQIWQRMRNWLNHSKSLCSPKDVKNFGLDNIDAEIKMLEELLCKGDEEIGFCHNDLQYGNIMIDEETRSITLIDYEYSSYNPVAYDLANHFCEMAANYHSDTPHVLDYSKYPDLEVRQRFICIYLSSEGKEPSNSEVEQLMSAAEKYTLANHLFWGLWGLISSYVNTIDFDYKEYARQRFEQYWLKKPTLLESPSINISQDESVNGS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2820 358 Pfam Choline/ethanolamine kinase 66 265 - -
Lja2g2820 358 PANTHER CHOLINE/ETHANOALAMINE KINASE 2 357 - -
Lja2g2820 358 CDD ETNK_euk 39 335 - -
Lja2g2820 358 Gene3D - 84 342 - -
Lja2g2820 358 Gene3D Phosphorylase Kinase; domain 1 33 83 - -
Lja2g2820 358 PANTHER CHOLINE/ETHANOLAMINE KINASE 2 357 - -
Lja2g2820 358 SUPERFAMILY Protein kinase-like (PK-like) 35 341 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2820 Lja-Chr2 44207469 44212451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2820 17 344 Acyl Lipid Metabolism Gene Families AT1G74320 65.549 1.16e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2820 K14156 - gmx:547972 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2820 2 44207469 44212451 Lja2g2820 2 44207469 44212451 ECH
Lja2g2820 2 44207469 44212451 Lja5g0754 5 6938441 6943673 PCT