Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2801 ATGTTATTGGCAGTAGGAGGAGGATTCTTCTCTTCTTCAGCTTCAGGGTATAGTAAGGGCTTGAGCCTTCTCCTCTTGGGTCAGAGGATCCAAGAATCCGACTACTACGAGCTCCAACTGGCTTCTACAAAGAAGCACCTCTCCCGCAGGTGCGCTTCCTTTGTTTGCTTTGGTCGCGCCTCTGCAGGGCTTGACACTCAATCTCATCTTAAAGTGGGCCCTGCCCAACATCATGATGTCTCACCAGGGCCTCCAGTTTCCAACGAATGCAAAAAGCCTTCTACTCATGTAAATGGTGATAATAAAAAGGTTGCACTTAAAAGTAGCTTAAAAAGGCAACACAGCAATAAACTTGCTCCTGTACAGACTCGTAATGAACATGGGGCATCAGGTGGAAAGGGGAGGGATGCTCCTGGTCAAAAAGAGAGAAGAAAAGTGCACTGGACAGATGCTTGTGGTAGTGAGCTTGTTGAAATAAGAGAATTTGAGCCCAGTGAAGCAGATGGATCAATTGATGACTTTGATAGTAGGAGTTTCAGAGCCTGTTCCTGTGCTATTATGTAA 564 0.4592 MLLAVGGGFFSSSASGYSKGLSLLLLGQRIQESDYYELQLASTKKHLSRRCASFVCFGRASAGLDTQSHLKVGPAQHHDVSPGPPVSNECKKPSTHVNGDNKKVALKSSLKRQHSNKLAPVQTRNEHGASGGKGRDAPGQKERRKVHWTDACGSELVEIREFEPSEADGSIDDFDSRSFRACSCAIM* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2801 187 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 1 187 - -
Lja2g2801 187 Coils Coil 185 187 - -
Lja2g2801 187 PANTHER LOW AFFINITY POTASSIUM TRANSPORT SYSTEM PROTEIN 1 187 - -
Lja2g2801 187 MobiDBLite consensus disorder prediction 71 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2801 Lja-Chr2 43404640 43406509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2801 - - gmx:100801666 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2801 2 43404640 43406509 Lja2g2801 2 43404640 43406509 ECH
Lja2g2801 2 43404640 43406509 Lja5g0747 5 6862075 6866851 PCT