Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2745 ATGGAAGGTTTTTGGAACATGATTTGTGGTGGGGATTCTGGTTGTTCTGGGACAGGAGGAGAGCCTTTCTGTTATGATTTCAAGCTTATGAAAGATCCTTCCACATGCATCAACCATTTGTTGACCATTTTCTTTGATGTGTTACTTCTGATAATGATGTCACTCGTTATGATCCACAAGTGTTTGTCAGAACCAGTTCGGGGTCTACTCCGGGTAGAAAGATTACCAAAGTTGCAGCTAGTTTCTGCCATAACTAGTGGCTCTCTTGGGATGTTGCATTTGTGCATAGGCATTTGGGTTTTTGAAGAGAAGTTAAGGAAAACCCACAGTGTTCTCCCTCTAAATTGGTGGTTACTAGAATTCTTTCAAGGATTCACATGGATGTTAATCAGTTTAACTCAAAGTTTTCAGCTGAAACAAATTTCAAGAGCATGGTTGTGGGTGTTTTCTATTCTTGTAATCTTTGTTTCTGGCATTTTCTGTGCTTTATCCATATCTTATGCTTTTAGCAGCAGAGAACTTTCCCTCAAGGTAGCTTTAGATGTTCTGTCATTTCCAGGAGCAGCTTTACTCCTCTTATGCACATACAAAACATGCAAATCTGAAGACACTGACAGAGAAATTGATGAAAGCCTTTATGCCCCTTTAAATACCAAGTTCAATGAAGTTGATCCTGTTAGCTATGTAACTGCATTTGCCAAAGCTGGATTTTTTAGTAGGATGTCATTTTGGTGGTTGAATCCATTGATGAAAAGGGGTCAGGAAAGAACACTTCAGGATGAGGATATGCCAAGGTTGAGGGAGCCTGAACGAGCAGAAAGGTGCTATTTCTTTTTTGAAGATCAGTTAAACAGGCAGAAGCAAAAGGACCGATCATCATCACGTTCATCCATTTTATGGGCAATAGTTTCTTGCCACAAGAGAGAGATTTTGATATCAGGGTTCTTTGCACTACTCAAGGTACTCAGTTTGTCTTCTTGCCCTGTAATCCTGAATGCCTTTGTATTAGTTTCTGAGGATAATGGAAGTTTCAAATATGAAGGTCATGTATTGGCCATATCACTTTTCTTTATAAAGATCATAGAATCCCTATCTCAAAGGCAATGGTATTTTCGTAGTAGACTAGTTGGTATGAAAGTTAAATCATTACTTACTGCAGCCATTTATAAAAAACAATTGAGGTTATCCAATGCTGCTAGATTGGTTCACTCTGGTGGTGAGATAATGAGTTATGTGACAGTAGATTCTTACAGAGTTGGAGAATTTCCATTTTGGTTTCACCAGACTTGGACAACGATCCTCCAACTATGTATTGCACTAGTAATTCTCGTTCGTGCTGTTGGACTTGCAACAATTGCCTCATTGGTGGTGATAGTTCTCACTGTTCTTTTCAATGCTCCAATAGCAAAGTTACAGCATAAGTTTATGAGCAAACTGTTAAGGGCACAAGATGAAAGATTAAAGGCTAGTTCGGAGGCTCTAGTGAATGTCAAAGTGTTGAAGTTTTATGCGTGGGAAATCCATTTTAAAAATGCTATAGAAAGCTTAAGAAATGTGGAACTTAAATGGTTATCTTCAGTGCTGTTACAAAAAGGATATAATGTCATTATCTTTTGGTCTGCACCCATGTTTGTCTCTGCTGCTACCTTTGTGGCATGTTACTTCTTGAAAGTTCCTTTACATGCAAATAATCTTTTCACTTTTGTGGCAACTTTACGTCTTGTGCAATATCCAATTGCAACCATCCCAGATGTTATTGGAGTTGTTATTCAAGCAAATATTGCATTTACCCGGATTGTAAACTTCCTTGATGCACCAGAGCTGCAGAGAGAAAAAGTCAGAAACATGTGCTTTGACGAGAAGCTCAAGGGCACAATTTTAATTAACTCTGCTGAATTTTCATGGGAAGGTAATGCATCAAAGCCAACATTAAGAAACGTAAATTTAAATGTTAGTCCTGGGAAAAAGATAGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACTCTCTTAGCAGCAATTCTTGGAGAAGTCCCCAATACCAAAGGAAATATTGAAGTTTATGGGAAATTTGCTTATGTTTCTCAAACAGCATGGATACAAAGAGGAACAATACAGGAAAATATTTTGTTTGGATCAGCTTTAGATGTTCAAAGGTATCAAGAAACACTTCATAGATCCTCCCTTGTTAAGGACCTTGAGTTGTTTCCCCATGGTGACCTCACTGAAATAGGCGAGAGAGGAGTTAACCTAAGTGGAGGTCAGAAGCAGCGAATTCAACTAGCCCGTGCTCTTTATCAGAATGCTGATGTATATCTCCTGGATGATCCATTCAGTGCTGTTGATGCTCACACAGCCACAAATTTGATCAATGAATACATATTTGAAGGACTTACCGGAAAGACAGTTCTACTTGTGACTCATCAAGTTGACTTCCTCCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGAAAATCCCTACAAGCTGCTCCTTATCACAATCTATTGACCTCAAGCCAAGAATTCCAGGACCTAGTCAATGCTCACAAAGAGACTGCTGGTTCTGACCGGCTTGTAGACGTTACTTCTTCCCAGAGACATTCAAATTCTGGTAGAGAGATTATACAATCTTTCAAACAGGAGCAGTTTAAAGCATTAAATGGTGATGAATTAATTAAGCAAGAAGAGAGAGAAAGAGGATACAAAGGGCTCAAGCCTTATTTACAGTATCTGAATCAGAGCAGAGGTTACATATACTTCTCTGTAGGCACTCTTTCTTTCCTTATGTTTGTGATTTGCCAGATAATTCAAAACTCATGGATGGCTGCTAATGTTGACAACCCCCACGTCGGAACGTTGCAATTAATTCTTGTTTACTTGCTCATAGGACTTGGATCCGTAATTTTCTTAACGATTAGAAGTTTTCTTGTTGTTGCTTTGGGTGTTCAATCATCAAAATCGTTATTTTCACAGTTAATGAACTCCCTTTTCCGTGCACCAATGTTTTTTTATGACTCCACACCTTTGGGAAGGATACTTAGTCGGGTCTCGGCAGATCTGAGCATTCTGGATCTTGATATCCCATTTAACCTCACTTTTGCTGTGGGAAGTTCTATGTGCTGTTATGCTGATCTTTTAGTCTTAACAGCCATCACTTGGCAAGTCTTGTTTATCTCTATACCAATGGTTTATGTCGTAATACGCTTGCAGAGACACTACTATGCATGTGCAAAAGAATTTATGCGGATGGATGGCACAACAAAATCCTCTGTGGCTAATCATGTAGCTGAAACTGTTGCTGGATCTATGACAATAAGGGCATTTGCGGGGCAAGATCGTTTTATCAGGAAGAATCTTGATCTAATTGATGCCAATGCTAGTCCTTTCTTCCATAGTTTTTCCTCAAATGAGTGGTTGATCCAACGGTTAGAAACAGTCTATGCGATTGTTCTTGCCGCCACGACACTTTGCATGGTTATGCTTCCAACTGGGACTTTAACTTCTGGATTTATTGGCATGGCTCTATCTTATGGCTTTTCACTAAACGACTCCTTAGTATATTCAATTCGAAGCCAATGCATTTTAGAAAATTACATAGTATCTGTAGAGAGGCTAAATCAATACATGCATATACCAAGTGAGGCCCGAGAAGTCACAGAAGAAAATCGTCCTCCAGTTAATTGGCCAGCTGCAGGCAAAGTAGAAATACAGGATTTGCAGATACGATACAGGCCTGGGGGGCCACTTGTACTACATGGTATCACATGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGTAGGACAGGCAGTGGAAAGTCCACACTTATGGGTGCTTTGTTTCGTCTTGTCGAGCCAGCAGGAGGAAAAATTGTAGTTGATGGCATAGACATCTCTTCTATTGGCCTTCATGATTTGAGATCAAGTATTGGAATTATACCTCAGGATCCTACCCTTTTCATTGGAACAGTTAGATATAATTTGGACCCTTTATCTCAACACTCTGATCAAGAAATATGGGAGGTTCTTGGCAAGTGTCAGTTGCGAGAGTCTGTGCAGGATAAAGGTGGCTTAGACTCTTCAGTTGTTGAAGATGGATCAAATTGGAGCACTGGGCAAAGGCAGTTATTCTGTTTGGGGCGTGCTCTTTTGAGGAGGAGTAGGATATTAGTGCTGGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTACAGAAAACCATTAAGAGTGAATTTGCAGATTGTACGGTAATCACTGTCGCCCACAGGATACCAACCGTGATGAATTGCACTATGGTTCTTGGCATCAATGAGGGAATGCTAGCAGAGTACGATGAGCCAATGAAATTGATGAAGAGAGAAAGATCTTTGTTTAGGCAACTTGTTAAGGAATACTGGTCTCATTTTCAGTCCGCAGAATCACATTGGAAGTTGTGA 4452 0.3973 MEGFWNMICGGDSGCSGTGGEPFCYDFKLMKDPSTCINHLLTIFFDVLLLIMMSLVMIHKCLSEPVRGLLRVERLPKLQLVSAITSGSLGMLHLCIGIWVFEEKLRKTHSVLPLNWWLLEFFQGFTWMLISLTQSFQLKQISRAWLWVFSILVIFVSGIFCALSISYAFSSRELSLKVALDVLSFPGAALLLLCTYKTCKSEDTDREIDESLYAPLNTKFNEVDPVSYVTAFAKAGFFSRMSFWWLNPLMKRGQERTLQDEDMPRLREPERAERCYFFFEDQLNRQKQKDRSSSRSSILWAIVSCHKREILISGFFALLKVLSLSSCPVILNAFVLVSEDNGSFKYEGHVLAISLFFIKIIESLSQRQWYFRSRLVGMKVKSLLTAAIYKKQLRLSNAARLVHSGGEIMSYVTVDSYRVGEFPFWFHQTWTTILQLCIALVILVRAVGLATIASLVVIVLTVLFNAPIAKLQHKFMSKLLRAQDERLKASSEALVNVKVLKFYAWEIHFKNAIESLRNVELKWLSSVLLQKGYNVIIFWSAPMFVSAATFVACYFLKVPLHANNLFTFVATLRLVQYPIATIPDVIGVVIQANIAFTRIVNFLDAPELQREKVRNMCFDEKLKGTILINSAEFSWEGNASKPTLRNVNLNVSPGKKIAICGEVGSGKSTLLAAILGEVPNTKGNIEVYGKFAYVSQTAWIQRGTIQENILFGSALDVQRYQETLHRSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATNLINEYIFEGLTGKTVLLVTHQVDFLPAFDSVLLMSDGKSLQAAPYHNLLTSSQEFQDLVNAHKETAGSDRLVDVTSSQRHSNSGREIIQSFKQEQFKALNGDELIKQEERERGYKGLKPYLQYLNQSRGYIYFSVGTLSFLMFVICQIIQNSWMAANVDNPHVGTLQLILVYLLIGLGSVIFLTIRSFLVVALGVQSSKSLFSQLMNSLFRAPMFFYDSTPLGRILSRVSADLSILDLDIPFNLTFAVGSSMCCYADLLVLTAITWQVLFISIPMVYVVIRLQRHYYACAKEFMRMDGTTKSSVANHVAETVAGSMTIRAFAGQDRFIRKNLDLIDANASPFFHSFSSNEWLIQRLETVYAIVLAATTLCMVMLPTGTLTSGFIGMALSYGFSLNDSLVYSIRSQCILENYIVSVERLNQYMHIPSEAREVTEENRPPVNWPAAGKVEIQDLQIRYRPGGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLMGALFRLVEPAGGKIVVDGIDISSIGLHDLRSSIGIIPQDPTLFIGTVRYNLDPLSQHSDQEIWEVLGKCQLRESVQDKGGLDSSVVEDGSNWSTGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIKSEFADCTVITVAHRIPTVMNCTMVLGINEGMLAEYDEPMKLMKRERSLFRQLVKEYWSHFQSAESHWKL* 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2745 1483 CDD ABCC_MRP_domain1 626 826 - -
Lja2g2745 1483 Gene3D - 1218 1469 IPR027417 -
Lja2g2745 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1198 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja2g2745 1483 Gene3D ABC transporter type 1, transmembrane domain 279 603 IPR036640 GO:0005524|GO:0016021
Lja2g2745 1483 Gene3D ABC transporter type 1, transmembrane domain 884 1217 IPR036640 GO:0005524|GO:0016021
Lja2g2745 1483 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Lja2g2745 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja2g2745 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 849 IPR003439 GO:0005524
Lja2g2745 1483 CDD ABC_6TM_ABCC_D2 921 1210 IPR044726 GO:0140359
Lja2g2745 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1468 IPR003439 GO:0005524
Lja2g2745 1483 Gene3D - 604 869 IPR027417 -
Lja2g2745 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 849 IPR027417 -
Lja2g2745 1483 ProSitePatterns ABC transporters family signature. 751 765 IPR017871 GO:0005524
Lja2g2745 1483 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 71 1480 - -
Lja2g2745 1483 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 71 1480 - -
Lja2g2745 1483 SMART AAA_5 1261 1443 IPR003593 -
Lja2g2745 1483 SMART AAA_5 653 826 IPR003593 -
Lja2g2745 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1467 IPR027417 -
Lja2g2745 1483 CDD ABCC_MRP_domain2 1233 1452 - -
Lja2g2745 1483 SUPERFAMILY ABC transporter transmembrane region 295 607 IPR036640 GO:0005524|GO:0016021
Lja2g2745 1483 Pfam ABC transporter 1252 1399 IPR003439 GO:0005524
Lja2g2745 1483 SUPERFAMILY ABC transporter transmembrane region 905 1215 IPR036640 GO:0005524|GO:0016021
Lja2g2745 1483 Pfam ABC transporter transmembrane region 925 1178 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja2g2745 1483 Pfam ABC transporter transmembrane region 311 576 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja2g2745 1483 Pfam ABC transporter 644 778 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2745 Lja-Chr2 41384745 41400799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2745 590 837 Calmodulin-binding Proteins AT2G36910 27.925 1.60e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2745 K05666 - gmx:100811468 2206.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2745 2 41384745 41400799 Lja2g2745 2 41384745 41400799 ECH