Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2703 ATGGAACAGAAGCATGTTCTGTTGTCAGCATTGAGTGTTGGGGTGGGGTTGGGTGTTGGGCTTGGATTGAGTTCAGGACAGGCTGTGCAGAAATGGGTTGGAGGGAACTCTGATGAGGTTTCTGGTGAGCAAATTGTGGAGGAGATCAAGAAGCTTGTAGTTGATGGGAAGGACAGCAAAGTTACATTTGATGACTTTCCTTATTACTTAAGTGAAAGAACTCGAGTTTTGTTGACAAGTGCAGCATATGTTCATCTAAAACATCTTAACGTTTCCAAGCATACCAGGAACCTCTCCCCAGCAAGCAGGGCAATTTTGCTCTCTGGTCCAGCAGAACTTTACCAGCAAATGCTTGCAAAAGCTTTAGCACATTACTTTGAATCGAAGTTGCTATTGATAGATATTACCGACTTCTCCATGAAGTTGCAGAGCAAATATGGATATACTAGAAAAGAACCATCTTTCAAAAGGTCAATATCCGAGATGACTTTGGAGAGAATGTCTAGTTTGTTTGGTTCCTTTTCAATGCTGCCTCCAACCGGCGAAACTAGAGGGACTCTGCGTCAACAAAGCAGTGCTGTTGAAAGTTACAACAATCATCCAAAGCTTCGGAGGAATGCGTCTGCTGCGTCCGATTTAAGTAGCACTGCTTCCCAGAGCGGTCCAATAATGCCAGGTTCTTTAAGGCGTGCAAGTAGCTTGTGTTTTGATGAAAAGCTCTTCGTGCAGTCACTTTACAAGATTCTGGTTTCTATCTCAGAAACCGGTTCCATTATTTTATATATCAGAGACGTTGAGAAGCTCGTTATCAAATCACCAAGGTTATATAATTTACTGCAAAAAATGATAAAGAAACTATCAGGCTCGGTGTTGATACTCGGTTCCCAGATATCAGATCCAGAGGACGATTGCAAAGAAATCGATGAAAGGCTCCCTATGGTATTCCCCTATATCATTGAGATCAAACCTCCTGAAGATGAAACTCATCTTGGCAGCTGGAAAGGCCAGCTTGAAGAGGACATGAAAATTATTCAGTTTCAGGATAACAGAAACCACATTGCTGAAGTACTTGCACAAAATGACATTGATTGTGATGACTTGAATTCAATCTGCCATGCAGACACTATGATACTCAGTAATTATATTGAAGAAATTGTTGTATCTGCAATATCATATCATTTGATGAATACCAAGGATCCGGAATACCGAAATGGAAGGCTAGTTATATCATCCAATAGTTTGTCCCATGGATTGAGTTTATTCCAGGAAGGCAAGTGCAGTGGGAATCTGAAGACTAATGATTCGAGCAAGGAAAATGTGGGAGAAGACATTACTGGTGCAAAGAATGATGTGCGGTGTGACAACCAAGCACCTGAAAACAAAAATGAAACAGAGAAAGCCATCCCTGTAACAAAAAAAGATGGTGAAAATCCAACACCTGCAAAAGCTGAAGTTCCTGATAACGAATTTGAGAAGCGCATAAGACCTGAAGTTATCCCTGCAAATGAGATAGGGGTTACATTTGGAGACATTGGTGCAATGGATGAGATTAAAGAATCACTTCAGGAGTTGGTAATGCTTCCCCTTAGAAGACCAGACCTCTTCAAAGGTGGTCTTCTAAAGCCATGTAGAGGTATATTACTTTTCGGGCCTCCGGGAACCGGGAAAACAATGCTTGCCAAAGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATGTTTCAATGTCCACCATCACTTCAAAATGGTTTGGAGAAGACGAAAAGAATGTCCGCGCTCTGTTCTCGCTAGCAGCAAAGGTTGCTCCTACTATAATCTTTGTCGATGAGGTTGACAGCATGCTTGGTCAGAGGACTAGAGTTGGAGAGCATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACACTGGGATGGGCTATTAACTGCACCTGGTGAGCAAATTCTCGTTCTTGCTGCAACCAATAGGCCATTTGACCTCGATGAAGCAATTATTAGACGGTTCGAGCGCAGGATCATGGTTGGCCTTCCATCTGTTGAGAACAGGGAAATGATCCTGAAAACTCTCCTGGCTAAGGAAAAGCATGAAAACTTAGACTTCAAAGAGCTGGCAACCATGACAGAAGGATACAGTGGAAGTGATCTTAAGAATTTGTGCATCACCGCCGCTTATCGACCTGTGAGGGAGCTAATACAGCAAGAGAGAAAGAAGGATATGGAAAAGAAGAAAAAAGAGGCAGAAGGCCAAAACTCCGAAGATTCTTCAAATAATAAAGATAAAGAAGACCAAGAAATTATCCTGAGGGCTTTAAACATGGAAGACATGAAACAGGCCAAGGGTCAGGTGGCTGCGAGCTTTGCCACGGAAGGATCAGTAATGGCTGAGCTAAAGCAGTGGAATGAGTTGTATGGAGAAGGAGGTACAAGAAAGAAACAGCAGCTCACTTACTTCCTTTAG 2460 0.4232 MEQKHVLLSALSVGVGLGVGLGLSSGQAVQKWVGGNSDEVSGEQIVEEIKKLVVDGKDSKVTFDDFPYYLSERTRVLLTSAAYVHLKHLNVSKHTRNLSPASRAILLSGPAELYQQMLAKALAHYFESKLLLIDITDFSMKLQSKYGYTRKEPSFKRSISEMTLERMSSLFGSFSMLPPTGETRGTLRQQSSAVESYNNHPKLRRNASAASDLSSTASQSGPIMPGSLRRASSLCFDEKLFVQSLYKILVSISETGSIILYIRDVEKLVIKSPRLYNLLQKMIKKLSGSVLILGSQISDPEDDCKEIDERLPMVFPYIIEIKPPEDETHLGSWKGQLEEDMKIIQFQDNRNHIAEVLAQNDIDCDDLNSICHADTMILSNYIEEIVVSAISYHLMNTKDPEYRNGRLVISSNSLSHGLSLFQEGKCSGNLKTNDSSKENVGEDITGAKNDVRCDNQAPENKNETEKAIPVTKKDGENPTPAKAEVPDNEFEKRIRPEVIPANEIGVTFGDIGAMDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTAPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKHENLDFKELATMTEGYSGSDLKNLCITAAYRPVRELIQQERKKDMEKKKKEAEGQNSEDSSNNKDKEDQEIILRALNMEDMKQAKGQVAASFATEGSVMAELKQWNELYGEGGTRKKQQLTYFL* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2703 819 Gene3D - 505 677 IPR027417 -
Lja2g2703 819 ProSitePatterns AAA-protein family signature. 649 668 IPR003960 GO:0005524|GO:0016887
Lja2g2703 819 Coils Coil 737 757 - -
Lja2g2703 819 Gene3D - 678 748 - -
Lja2g2703 819 Pfam ATPase family associated with various cellular activities (AAA) 546 676 IPR003959 GO:0005524|GO:0016887
Lja2g2703 819 SMART AAA_5 542 679 IPR003593 -
Lja2g2703 819 MobiDBLite consensus disorder prediction 436 489 - -
Lja2g2703 819 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 819 - -
Lja2g2703 819 MobiDBLite consensus disorder prediction 736 763 - -
Lja2g2703 819 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 819 - -
Lja2g2703 819 Pfam AAA+ lid domain 698 742 IPR041569 -
Lja2g2703 819 MobiDBLite consensus disorder prediction 182 224 - -
Lja2g2703 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 372 IPR027417 -
Lja2g2703 819 MobiDBLite consensus disorder prediction 431 489 - -
Lja2g2703 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 745 IPR027417 -
Lja2g2703 819 CDD AAA 512 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2703 Lja-Chr2 38986537 38995015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2703 506 735 Calmodulin-binding Proteins AT3G56690 39.744 1.75e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2703 - - gmx:100817952 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2703 2 38986537 38995015 Lja2g2703 2 38986537 38995015 ECH