Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2694 ATGCTTGCACTGACAGATTTTCCACTACTTATTGCTAAACCATTTGAAGAAATTAAAATACCAACAAGTATACGAAGCACTGTGGTATGTGCTGCAAAAGGTAAAAGACCTAGATATCCACGAGTTTGGAAGACCCAGAAAAAAATTGGGACCATTTCCAAGGCTGCTAAACTTGTTCAGTCTATTAAGGAACTATCAAATGTCAAAGAGGAAGTTTATGGTGCTCTCGATTCATATGTTGCCTGGGAATTAGAGTTCCCTTTAATTACTGTAAAAAAGGCACTCAAGACTCTAGAATACGAACAAGAATGGAAGCGGATAATACAGATAACAAAATGGATGCTAAGCAAAGGTCAAGGAAAGACAATGGGAAGCTATTTCACATTACTCAATGCGTTAGCTGAGGATGACCGACTTGATGAAGCTGAAGAGCTTTGGACCAAGTTATTAATGCAGTACATGGAAAGCTTGCCTCGCAGATTCTTTGATAAAATGATATCTATCTACCGTAAGAGGGGCTTGCATGAGAAGATGTTTGAGATATTTGCAGACATGGAGGAGCTTGGTCTTCGACCTAGTATTTCGGTTGTGTCAATGATTGGAGATGCCTTCAAGGAGCTGGGTATGCTGGACAAATACGAGAAGTTACATATTAAATACCCACCGCCTAAATGGGAATATAGGTACATCAAAGGAAAGCATGTGAAAATCAGATTCGAAGATCAGTCCAACCAAGTCAATAAATACACAAGAAAGCATGATAATGTTGAACCTAATTCAGACTTAAAGGAGGATGATTGGTCTGAAGATGAAGAGACGAGTTCTGAGGTAATTGATGATGAGCAATTCGAACAGGATGCCAATGTAATATGCATGGAACCTGAACAAATTTCAGATGATTCATTTGAGAGTATCGAAATAGAACCAGTTGTAGATGCATAA 942 0.3864 MLALTDFPLLIAKPFEEIKIPTSIRSTVVCAAKGKRPRYPRVWKTQKKIGTISKAAKLVQSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEYEQEWKRIIQITKWMLSKGQGKTMGSYFTLLNALAEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYRKRGLHEKMFEIFADMEELGLRPSISVVSMIGDAFKELGMLDKYEKLHIKYPPPKWEYRYIKGKHVKIRFEDQSNQVNKYTRKHDNVEPNSDLKEDDWSEDEETSSEVIDDEQFEQDANVICMEPEQISDDSFESIEIEPVVDA* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2694 313 MobiDBLite consensus disorder prediction 294 313 - -
Lja2g2694 313 Pfam PPR repeat 128 149 IPR002885 -
Lja2g2694 313 Pfam PPR repeat 165 190 IPR002885 -
Lja2g2694 313 MobiDBLite consensus disorder prediction 248 284 - -
Lja2g2694 313 PANTHER OS01G0757700 PROTEIN 9 287 IPR044646 -
Lja2g2694 313 MobiDBLite consensus disorder prediction 248 262 - -
Lja2g2694 313 MobiDBLite consensus disorder prediction 299 313 - -
Lja2g2694 313 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 158 192 IPR002885 -
Lja2g2694 313 Gene3D Tetratricopeptide repeat domain 53 220 IPR011990 GO:0005515
Lja2g2694 313 PANTHER OS01G0757700 PROTEIN 9 287 - -
Lja2g2694 313 MobiDBLite consensus disorder prediction 263 283 - -
Lja2g2694 313 TIGRFAM PPR: pentatricopeptide repeat domain 163 193 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2694 Lja-Chr2 38475114 38479277 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2694 - - gmx:100781797 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2694 2 38475114 38479277 Lja2g2694 2 38475114 38479277 ECH