Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2688 ATGGAAGAATATGAATTCCCATGTTGTGAGGGAAATTTCTGGTTGTTCCTGATTACATGTCTGGTGATTGTGTCACTAGCAGGCATTGCATCAGGCCTAGCTCTAGGACTATTGTCATTCAGCCAAGTTGATCTTGAGGTCATCATTAAATCTGGCTCTTCAAAAGACAGAAAACATGCAGAAAGGATTCAACCATTTGTAAAGAATGGACATTTCGTCCTGTGTACCCTTCTTCTTGGAAAATCACTGGCTATGGAGGCATTGCCAATTTTTATGGACGCAATAATCCCAGCTTGGTTTACAATTCTCATGTCAGCACCCTTGGTGACTGTATTTGCAGAGATTTTACCTCAAGCTATATGCTCTCGGTATGGACTTTCTTTGGGAGCGAAATTGGCTTTCTTTACTCAATTCCTTATGCTGATCTTCTTCCCTATAACCTACCCAGCTAGCAAGATGCTGGATTGGGCTCTAGGGAAAGAGCAGTCAGTTCTTTTGAGAAGATCAGAGTTGAAGACATTTGTGGACTTACATGCGAATGAGGCAGGGAAAGGGGGAGAATTGTCACATCATGAAACTTCTATAATCAGAGGTGCTATAGATTTGACTCAGAAGGCAGCTAAAGATGCAATGACACCCATATTTGAAACTTTTTCTCTGGATATAAATTCCAAACTAGACATGCATACAATGACTCAAATTATGAGTAAAGGTCACAGTCGAATACCTATACACTCTGGAAACCCAAGAAATATTGTTGGTCTCATCTTGGTTAAAAATCTAATCTTCTGCCGCCCAGAAGATGAGACCCCAATCAAGAATTTGATCATCAGGAGAATTCCTAGGGTGTATGAAAGTTGGCCACTATATGAGATATTGAGTCAATTCAAGCAGGGTTATAGCCATATGGCTGTTGTCCTGAAGGGCAACAAGGACATACCCAAAAGTGCATCTGATTCAGTCGATACACCTCCCATTTTATACAATACTCATAAAATATCAAACCAAGCTCAAATTACTGGAGAGTCTGATTCTTCCTTTATTCTGGAAATGAGTCCGAGAGGTTCTATTTATGAATCAACTTTGTCTTCCAGTGACGTTGAATTTCATAGTCTAACATTAAAAAATCTCATGATACCTGATGATGAACTTCAAGAATCCAAACAGTGGGAACAAGAAGGTAGATATGCCTCACAGGAACAAATGGAGTCTCTTGCTGCTATTGTGGATGAAGAGGTGATTGGCATAATTACAATGGAGGATGTTATGGAGGAACTATTACAGGGGGACATACTGGATGAAACTGATGAATTTGTTCAGGTGCATAAGAACATTAGAATTAACCTGAGGAATTCACAAAGATCACAATCAAGATCATCAAGGAGAGGTTCTTGGTCCAGTCATCATTTGAATTGA 1416 0.3969 MEEYEFPCCEGNFWLFLITCLVIVSLAGIASGLALGLLSFSQVDLEVIIKSGSSKDRKHAERIQPFVKNGHFVLCTLLLGKSLAMEALPIFMDAIIPAWFTILMSAPLVTVFAEILPQAICSRYGLSLGAKLAFFTQFLMLIFFPITYPASKMLDWALGKEQSVLLRRSELKTFVDLHANEAGKGGELSHHETSIIRGAIDLTQKAAKDAMTPIFETFSLDINSKLDMHTMTQIMSKGHSRIPIHSGNPRNIVGLILVKNLIFCRPEDETPIKNLIIRRIPRVYESWPLYEILSQFKQGYSHMAVVLKGNKDIPKSASDSVDTPPILYNTHKISNQAQITGESDSSFILEMSPRGSIYESTLSSSDVEFHSLTLKNLMIPDDELQESKQWEQEGRYASQEQMESLAAIVDEEVIGIITMEDVMEELLQGDILDETDEFVQVHKNIRINLRNSQRSQSRSSRRGSWSSHHLN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2688 471 Gene3D - 368 434 IPR046342 -
Lja2g2688 471 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Lja2g2688 471 CDD CBS_pair_CorC_HlyC_assoc 207 307 IPR044751 -
Lja2g2688 471 Gene3D - 192 322 IPR046342 -
Lja2g2688 471 SUPERFAMILY CBS-domain pair 196 428 IPR046342 -
Lja2g2688 471 ProSiteProfiles CNNM transmembrane domain profile. 9 192 IPR002550 -
Lja2g2688 471 PANTHER CBS DOMAIN PROTEIN 1 467 - -
Lja2g2688 471 MobiDBLite consensus disorder prediction 452 471 - -
Lja2g2688 471 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 467 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2688 Lja-Chr2 38183366 38187580 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2688 K16302 - gmx:100791387 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2688 2 38183366 38187580 Lja2g2688 2 38183366 38187580 ECH