Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2675 ATGAAGAAAGTAGTGTTGAAGGTAGAACTTTATGATGACAAAATTAAGAAAAAAGCTATGAAAGCAGTCTCTGGCCTTTCAGGGGTTGAGTCAGTCTCAGTGGACATGAAGGACCAGAAAATGACCTTAATTGGAGACATCGACCCTGTTGAAGTAGTGGAAAAGTTGAGAAAACTGTGTCATGCTGAAATTCTTTCAGTTGGACCTGCCAAAGAGGAGAAGAAGGAAGAAAAGAAAGATGAAAAGAAGCCAGAAGAAAAGAAAAAGGATCCAAAGGAAGAAATGGCTGAAATGATGAGAGCCTATGAAAACTATTATAGTCAGATGAGACAGCCAAATCCATACTACTATTACAGAACTGTGGAAGAGGATCCTAGTGGCTGTGTTATCTGTTAA 396 0.3889 MKKVVLKVELYDDKIKKKAMKAVSGLSGVESVSVDMKDQKMTLIGDIDPVEVVEKLRKLCHAEILSVGPAKEEKKEEKKDEKKPEEKKKDPKEEMAEMMRAYENYYSQMRQPNPYYYYRTVEEDPSGCVIC* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2675 131 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Lja2g2675 131 Gene3D - 1 73 - -
Lja2g2675 131 MobiDBLite consensus disorder prediction 69 94 - -
Lja2g2675 131 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 131 - -
Lja2g2675 131 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Lja2g2675 131 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 131 - -
Lja2g2675 131 CDD HMA 21 59 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2675 Lja-Chr2 37880151 37881613 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2675 - - gmx:100306444 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2675 2 37880151 37881613 Lja2g2675 2 37880151 37881613 ECH