Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2674 ATGAAGAAAGTAGTGTTGAAGGTGGAACTTTATGATGACAAAATCAAGAAAAAAGCTATGAAAGCAGTCTCTGGCCTTTCAGGTGTTGAGTCAGTCTCAGTGGACATGAAGGACCAAAAAATGACCTTAATTGGAGACATCGACCCTGTTAAGGTAGTGGGCAAGTTGAGAAAACTGTGTCATGCTGACATTCTTTCAGTTGGACCTGCCAAAGAGGAGAAGAAGGATGAAAAGAAGAAAGAAGAGGGAAAGAAGCCAGTAGAAAAGAAAAAGGATCCAAAGGAAGAAATGGCTGAAATTGTCAGGGCCTATGAAAACTATTATAGTCAAATGAGACAGCCAAATCCATATTACTATTACAGAACTGTGGAAGAGGATCCTAATGGCTGTGTTATCTGCTAA 402 0.398 MKKVVLKVELYDDKIKKKAMKAVSGLSGVESVSVDMKDQKMTLIGDIDPVKVVGKLRKLCHADILSVGPAKEEKKDEKKKEEGKKPVEKKKDPKEEMAEIVRAYENYYSQMRQPNPYYYYRTVEEDPNGCVIC* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2674 133 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 133 - -
Lja2g2674 133 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Lja2g2674 133 Gene3D - 1 73 - -
Lja2g2674 133 MobiDBLite consensus disorder prediction 69 95 - -
Lja2g2674 133 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
Lja2g2674 133 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 133 - -
Lja2g2674 133 CDD HMA 21 59 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2674 Lja-Chr2 37826320 37827649 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2674 - - gmx:100306444 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2674 2 37826320 37827649 Lja2g2674 2 37826320 37827649 ECH