Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2658 ATGACGGATGTGATGCTGCATATATATGATGTGACGAATAGCGGATCTGAGAAAACCAACAGCACCATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTTGGTGGCATTTTCCACAGTGCTGTTCAGGTTTATGGGGAGGAGGAATGGTCTTTTGGATATTGTGAGCAAGGCACTGGAGTATTTAGTTGCCCTTCTGGAAAAAATCCAATGTATACATATCGTGAGTGCATTATTCTTGGGAAAACAAGCTTTTCCATTTTCAAGGTAAATCAAATTTTAAGAGAACTTAGTAGAGAGTGGCCCGGAAGTTCGTATGATCTATTGTCCAAAAACTGCAACCACTTCTGTGATGAATTCTGTGAGAGGCTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACAGCTATGGAAGTGGCTGGAAATACTGCATTACGGTTCCGGCAAGCCAAAACAGAGATTGTATCAGCAAGCAAAGTCGCATACAGGTTCCTCGTAGGTGTTACTAATAATGTTAAAACTGGCCCAGAGTCCCCTAACAATTCAAACAGAGGAGGAGGATCCCCTAGATTTCAAGCTTCTTGGTTGAAAAACATTATTACTAATGGTGCTAAACCATCTACTAGTTCAGAAGGTGAGAGTCAGAATGGGGTTGTGCCACTACAACACACACGAGAAGATGATGACAACAAGGCTCTGCTGCGTAGTTCATCTTCACATGATAGTTGA 756 0.422 MTDVMLHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEEEWSFGYCEQGTGVFSCPSGKNPMYTYRECIILGKTSFSIFKVNQILRELSREWPGSSYDLLSKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLVGVTNNVKTGPESPNNSNRGGGSPRFQASWLKNIITNGAKPSTSSEGESQNGVVPLQHTREDDDNKALLRSSSSHDS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2658 251 SMART DUF862_2a 2 157 IPR008580 GO:0008233
Lja2g2658 251 MobiDBLite consensus disorder prediction 211 251 - -
Lja2g2658 251 PANTHER PPPDE PUTATIVE THIOL PEPTIDASE FAMILY PROTEIN-RELATED 1 225 - -
Lja2g2658 251 PANTHER DESUMOYLATING ISOPEPTIDASE 1 225 IPR008580 GO:0008233
Lja2g2658 251 MobiDBLite consensus disorder prediction 231 251 - -
Lja2g2658 251 MobiDBLite consensus disorder prediction 211 230 - -
Lja2g2658 251 Gene3D PPPDE domains 1 169 IPR042266 -
Lja2g2658 251 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Lja2g2658 251 Pfam PPPDE putative peptidase domain 3 146 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2658 Lja-Chr2 37278776 37283234 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2658 - - gmx:100814440 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2658 2 37278776 37283234 Lja2g2658 2 37278776 37283234 ECH