Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2646 ATGGCATCACGCTACGAACTCGAAACGAAGCTATCATCAGCTCGCGGCTTGAAGAACGTGAACTGGCGCCACGGCCCAAACAAGCCATACGCCGTCGTGTGGGTCGACCCGAAGAACAAATTCTCGACCAGAGCCGACGAAAACGGCGACACCGAAGCCAATTGGGACCAGACCCTCACGATCCCTCTACCACCGGAGCCGCTTGAAGATCTCACGCTCTTCATCGACGTCGTCCACTTCGGCTCCGAGGAAGACACCAAGCCGCTCATCGGCTCGGCTAAGCTCAAGCTGAGGGAGATTCTCGATGAAGCCGGGATCGGCGATCGAGCCAGCCGCGCCCTCACGCTGAAACGCCCTTCCGGGAGGCCGCAAGGGAAGGTGGACGTGAAGGTGGCGATCAAAGAGTCCGGCTACCGTGCGCCGCCGCCGGGTGCGTATTACGCTGCATCTCCCTACGGCGTTCCTCCTGCTCAGTCGCGTGATTATTCCCATGCTCCGCCGGCGTATGGAGCACCGTACGGTGCTCCGCCGCAGGATCCGTATTACTCCGCCGCGCCGCCGTCGGGGTATCCTTACAATGCGCCGCCGCAGACGGCAGCGTATGGTGGTCAGGGGTATCCTGGTCAAACGGCGTCGTATGGACAGGGGTATCAGGGTCAAACGGCGTCGTATTGTGGACAGGGGTATTCGGGGCAAACGGCGTCGTATGGGTATACTGAGGAGAAGAAGAAGAGTAAGTTTGGGGGGATGGGGACAGGATTGGCTGTAGGCGCGGTGGCTGGGGTTCTAGGTGGAATCGCATTGGTGGAAGGTGCGGAGTATGTTGAGGATAAGATTGCTGACGATGCTGCGGAAAAAGTTGAAGATGATCTTGGCTTTGATGGAGACGATGGTTACGATGGTGACGATTTCTAA 915 0.5869 MASRYELETKLSSARGLKNVNWRHGPNKPYAVVWVDPKNKFSTRADENGDTEANWDQTLTIPLPPEPLEDLTLFIDVVHFGSEEDTKPLIGSAKLKLREILDEAGIGDRASRALTLKRPSGRPQGKVDVKVAIKESGYRAPPPGAYYAASPYGVPPAQSRDYSHAPPAYGAPYGAPPQDPYYSAAPPSGYPYNAPPQTAAYGGQGYPGQTASYGQGYQGQTASYCGQGYSGQTASYGYTEEKKKSKFGGMGTGLAVGAVAGVLGGIALVEGAEYVEDKIADDAAEKVEDDLGFDGDDGYDGDDF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2646 304 Pfam C2 domain 7 105 IPR000008 -
Lja2g2646 304 PANTHER INGRESSION PROTEIN FIC1 1 295 - -
Lja2g2646 304 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 135 IPR035892 -
Lja2g2646 304 Gene3D C2 domain 4 137 IPR035892 -
Lja2g2646 304 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Lja2g2646 304 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Lja2g2646 304 SMART C2_3c 6 109 IPR000008 -
Lja2g2646 304 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2646 Lja-Chr2 36884347 36885965 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2646 - - gmx:100817630 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2646 2 36884347 36885965 Lja2g2646 2 36884347 36885965 ECH