Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2641 ATGGCACTGGCTCCTATTCCAAAAGTTATCCTGGGTTCAACTGCCTTTGCAATCTTCTGGGTATTAGCTGTTTTCCCAGCAGTGCCTTTTCTACCCATTGGGAGAACTGCTGGTTCACTTCTAGGTGCAATGCTGATGGTCATATTCCGAGTCCTTACTCCGGATCAAGCTTATGCTGCAATTGATCTCCCAATTCTCGGTCTTCTTTTCGGGACGATGGTTGTCAGTATTTATCTTGAAAGAGCAGACATGTTTAAGTACCTAGGGAAATTACTCTCTTGGAAAAGCCAAGGAGCAAAGGACTTGCTTTGTCGAATCTGTCTGATTTCTGCTGTATCAAGTGCTCTATTCACCAATGACACGTCATGTGTTGTTTTAACTGAGTTCATATTGAAAATCGCGAGGCAACACAACCTCCCACCCCATCCTTTCCTACTTGCACTTGCCTCCAGTGCTAATATTGGGTCCTCAGCAACTCCAATTGGCAACCCCCAGAATCTGGTTATAGCTGTTCAGAGTAAAATTTCATTTGGGAAGTTTTTGACTGGTATTCTTCCGGCTATGCTCGTAGGAGTCGTAGTGAATGCTTTAATTCTTATAGCTATGTATTGGAGAATATTATCTATTCATAAGGATGTAGAGGATCCAGTTGCAGAAGTTGAAGCAACTGAGGAGGTTAATTCGCATCAGTTTTCTCCAGCCACAATGTCTCATGTTACATCCTCTAATTCTCAAGAATTGAATGGTTATCTAGAAACTTCTAGTCTTCAAAACTCTCCTCTAGTTCATAATTTAAGAAACCGATCAACTCCAACTGACAATGAAATTCACAAGGTTCTTGGTGGCACGCTGGACTCCACAAGAAACTCAAATGCATCAATGGAGGGGACAAATGATGTGCCCTCTCAGATAAAAGAGGAAACAAATCCTTCAAAAACTGTTGCAGAAGTAGATAACCCAACAGAACATGTAATGCACTCTTCAGAAGGAAAGGGCAATATAGACGTAATGTGGAAAGATATACTGTGGAAATCTTGTGTTTACATGATCACATTAGGAATGTTGATTGCAATGCTTTTAGGTTTAAATATGTCATGGAGTGCAATTACAGCTGCACTAGCTTTGGTTGTTCTTGATTTCAAAGATGCTAGACCATGCTTGGAGAAGGTTTCGTATTCGCTATTGATATTCTTTTGTGGAATGTTTATCACAGTAGAAGGCTTCAATAAAACTGGAATTCCAAGTTCCTTATGGGACTTGATGGAGCCTTATTCTGAAGTAGACCGCGCTAGTGGAATAGCCGTACTTGCTGTAGTTATACTTGTCTTATCAAATTTGGCTTCGAATGTTCCAACTGTTTTATTGCTTGGAGCAAGAGTTGCAGCATCAGCTGCTACAATTTCGAAAGAAGATGAGAAAAAGGCATGGCTCATCTTGGCTTGGGTTAGCACCATAGCAGGGAACCTGTCACTGCTGGGATCAGCAGCAAACTTGATAGTGTGTGAACAAGCGCGCCGAGCTCCGAACCTTGCTTACACATTAACCTTCTTGAGCCATCTGAAATTTGGCCTTCCTTCTACTCTTGTGGTCACTGCTATTGGTTTGACACTCATAAGATGA 1620 0.416 MALAPIPKVILGSTAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFRVLTPDQAYAAIDLPILGLLFGTMVVSIYLERADMFKYLGKLLSWKSQGAKDLLCRICLISAVSSALFTNDTSCVVLTEFILKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGKFLTGILPAMLVGVVVNALILIAMYWRILSIHKDVEDPVAEVEATEEVNSHQFSPATMSHVTSSNSQELNGYLETSSLQNSPLVHNLRNRSTPTDNEIHKVLGGTLDSTRNSNASMEGTNDVPSQIKEETNPSKTVAEVDNPTEHVMHSSEGKGNIDVMWKDILWKSCVYMITLGMLIAMLLGLNMSWSAITAALALVVLDFKDARPCLEKVSYSLLIFFCGMFITVEGFNKTGIPSSLWDLMEPYSEVDRASGIAVLAVVILVLSNLASNVPTVLLLGARVAASAATISKEDEKKAWLILAWVSTIAGNLSLLGSAANLIVCEQARRAPNLAYTLTFLSHLKFGLPSTLVVTAIGLTLIR* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2641 539 Pfam Citrate transporter 27 486 IPR004680 GO:0016021|GO:0055085
Lja2g2641 539 PANTHER TRANSPORTER ARSB-RELATED 1 539 - -
Lja2g2641 539 MobiDBLite consensus disorder prediction 282 315 - -
Lja2g2641 539 CDD YbiR_permease 28 538 - -
Lja2g2641 539 MobiDBLite consensus disorder prediction 283 315 - -
Lja2g2641 539 PANTHER TRANSPORTER ARSB-RELATED 1 539 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2641 - - ccaj:109818851 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2641 2 36649740 36654626 Lja2g2641 2 36649740 36654626 ECH