Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2633 ATGGCTTCGACCCAATTCGATCATCGGAAGGTTCGTGTCGTCGCCAAAATTCGGGGTTTTTCGAGTCCTGATGCGAATTCCGGAGCAGTGGATTGGGTATCCGTGAACCGGGAATCGTCGGAGGATGTCACCATCTCCTTCGGAAAACAGTCTTCTAGTCGATATTCGGTGGATTATTGCTATAAGGAACATGAAGATAATGAAATGATATATACAAGGGAGGTGAAGCCTCTTGTTTCAGCAGTTTTTGAAGGTCATAGCAGTACTGTTATTGCTCATGGAGCTAGAGGGAGTGGAAAGACCCACCTAATTCAGGGCTCTACTGAAACTCCGGGTCTGGCTGTGTTGGCTATGGTTGAGTTTCTTTCAATCGCTGAGAAAAATGGGAAATCTATAGCTGTTTCTTTCTATGAGGTTGATCATCAGGATCATGCTATTGATTTAATAAACCCAGAACAACCACCAATTTCGATATTTGAAGGTCGTGGAAGAATTCAGTTTAAAGGACTTACTCAGAATCCTGTAAAATCAATTGCAGAGTTTCAGAATTTGTATTGCACTGTATGCTCTGCACTGAAGGCTGCCCCCAAGAAAGGGTATGAGTATGCTCGTAGAAGCCACATGGGATTAATTGTGTATGTCTTTTCCCAGAATGAAAGCATAGAAGGTCTTGTGAGCAAAATGAATTTTGTGGATATGGCAGGTTATGAAGATGCTAGAAAGAAAAGTAGTGACATCTCTGGGTTGGCTGAGACTAACAATATTAACAAGTCAATTTATGCTGTTATGAATGTTTGTCATGCTTTGAGCACAAATGAAAGTCGTGTTCCCTATCGAGAAAGCAAACTGACACGCATGTTGCAGGATTGTTTGAGGGGGACGGGCAAAATTCTGTTGGTTTCCTGCTTGAACCAAACACCCTTAGGTTCCACAATGAAAACTGGAACTTCAGCAAAGCAAGTGGTGACTTCTCGTAAGAACCAGATGCTCAAAAGTGTTTCTGCAACAAAAACTGGAAGTTCCGCAAAACAAATGGTGACTTCTCATAAGAACCAGCTAGCCAAAAGTGTTTCTGCAACAGCAAAGAAAATTTCCAGATCTCAAATAAATGAAAAGAAAGCTACTGTTGGTTTGAAGTCTGCAGTGAAAGGAAGGAAATTGTTTGATGAAATCAGTCATTCTTCTACTAAAGTTGAGAAGGAAGTTTCCACTGCCCATGTTACCAAAGCACCAGAGCTTTTATTGGAGAATTCATTATTAGAAGCTGGAGATCCAGTCGAACTCAGCTCTGATAACTCATTTTCAGATGATAGTAATAATGATAACTCATGTTTGAACGCAAGCAGTGAAGTGGAATCTGATTCCCCAGTGGAAAATGAAATGGATCATCAAGAGACACATACCTCTGATGCTGGAACTTACTCTAAAGCATTGTCAATAGTTCAGGAAGGTGATAACATAAACAAGGAGAACAGAAGCCTAGTGGCAAATGGAGACAGTTCACCACCCATTAGTTCTCAACTGCGAGAACTTTCCAACAGTCTCAAAATGCTTTATACGTCAACTCCGTTGTGCACACAGATACTGGAGAAGGAATGTATTTCAGTTGAAGATCAGATGTCTGCTGATATTCAAGAACCAAAAACTCCTGTAATTGAACAGAATATGAGCTTTAATTATAATGTGATGAATTCCAAAAGTCCTTGGGAAACATTCAGCATGCGTGGTTCTGGAATGAAGAACTCTCTTGTCCAGGAATACCTTAGGTTTTTGAACACAGCTGAGAAGGAAGACTTGAAAAAACTGAAGGGAATTGGAGAGAAGAGAGCAACCTTCATACTTGAGCTGCGAGAAGACTCTCCAGAACCATTTAAGAGTCTTGATGATTTAAAGGATATTGGACTTTCAGCTAAGCAGATTAAGGGAATAATGAAGAAGGAAGTTGGAGAGCTTTTCAACTAG 1962 0.4062 MASTQFDHRKVRVVAKIRGFSSPDANSGAVDWVSVNRESSEDVTISFGKQSSSRYSVDYCYKEHEDNEMIYTREVKPLVSAVFEGHSSTVIAHGARGSGKTHLIQGSTETPGLAVLAMVEFLSIAEKNGKSIAVSFYEVDHQDHAIDLINPEQPPISIFEGRGRIQFKGLTQNPVKSIAEFQNLYCTVCSALKAAPKKGYEYARRSHMGLIVYVFSQNESIEGLVSKMNFVDMAGYEDARKKSSDISGLAETNNINKSIYAVMNVCHALSTNESRVPYRESKLTRMLQDCLRGTGKILLVSCLNQTPLGSTMKTGTSAKQVVTSRKNQMLKSVSATKTGSSAKQMVTSHKNQLAKSVSATAKKISRSQINEKKATVGLKSAVKGRKLFDEISHSSTKVEKEVSTAHVTKAPELLLENSLLEAGDPVELSSDNSFSDDSNNDNSCLNASSEVESDSPVENEMDHQETHTSDAGTYSKALSIVQEGDNINKENRSLVANGDSSPPISSQLRELSNSLKMLYTSTPLCTQILEKECISVEDQMSADIQEPKTPVIEQNMSFNYNVMNSKSPWETFSMRGSGMKNSLVQEYLRFLNTAEKEDLKKLKGIGEKRATFILELREDSPEPFKSLDDLKDIGLSAKQIKGIMKKEVGELFN* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2633 653 MobiDBLite consensus disorder prediction 426 474 - -
Lja2g2633 653 PANTHER KINESIN-LIKE PROTEIN KIN-10C 10 531 - -
Lja2g2633 653 PANTHER KINESIN-LIKE PROTEIN KIN-10C 536 648 - -
Lja2g2633 653 Pfam Kinesin motor domain 18 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2633 653 PANTHER KINESIN-RELATED 10 531 IPR027640 GO:0003777|GO:0007018
Lja2g2633 653 PANTHER KINESIN-RELATED 536 648 IPR027640 GO:0003777|GO:0007018
Lja2g2633 653 Gene3D - 579 651 - -
Lja2g2633 653 SMART kinesin_4 8 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2633 653 Gene3D Kinesin motor domain 2 322 IPR036961 -
Lja2g2633 653 Pfam Helix-hairpin-helix motif 591 639 - -
Lja2g2633 653 PRINTS Kinesin heavy chain signature 276 297 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2633 653 PRINTS Kinesin heavy chain signature 85 106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2633 653 PRINTS Kinesin heavy chain signature 227 245 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2633 653 MobiDBLite consensus disorder prediction 428 454 - -
Lja2g2633 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 314 IPR027417 -
Lja2g2633 653 SUPERFAMILY RuvA domain 2-like 583 646 IPR010994 -
Lja2g2633 653 ProSiteProfiles Kinesin motor domain profile. 10 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2633 Lja-Chr2 36347498 36352577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2633 10 312 Calmodulin-binding Proteins AT5G65930 27.160 2.20e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2633 K10403 - gmx:100809612 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2633 2 36347498 36352577 Lja2g2633 2 36347498 36352577 ECH