Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2632 ATGCCCTCCCTTTCCCTTTTCCTCACCCTTCTCCTCCTCCTCTCCACTGCCTCCTTCTCCCAAAGCAGGAAGAAATTAAGGAACAAACATCATGAATCTGAGTTGCGGTTTTCAGGTCACTCTGTTTATTATTCCAACAGAGTTGATCCCTCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTCTTTCTCTACAAAGGTTTTTTGTCAGACAAGGAGTGTGACTACCTTATTTCTTTGGCATATGCTGTGAAAGAAAAGTCCTCGGGGAATAATGGCCACTCAGAGGATGAAACTTCATTGGATATGGAAGATGATATTGTTGCAAGGATTGAAGAAAGAATTTCAGTTTGGACTTTTCTTCCTAAAGAGAATAGCAAACCTTTGCAGGTCATGCATTATGAACCTGAACAGGAAGGGAATAACTTAGATTATTTTGCAAACAAAACCAAAGTGGAATTAAGTGGACCTTTACTGGCAACAGTTGTTTTATATCTCTCAAATGCTTCTCAAGGGGGTCAAATTCTCTTTCCAGAATCAGTGCCCAATAGTATTAGCTGGTCAAATTGTAGAAGCAGTAGTAAGATTCTCCAACCAGCAAAAGGGAATGCACTTCTGTTTTTCTCTCTTCATCCAAGTGCATCTCCGGACAAGAGTAGCTACCATGCTAGGTGCCCTGTCCTTAAGGGTGATATGTGGTCTGCAATTAAGTTCTTCTATGCAAGATCAATTAGTGGAGGGAAACTCTCAACCATATCAGATGGTGGTGAATGTACTGATGAGGATGACAGCTGTCCTGCTTGGGCAGCCATGGGAGAATGTCAGAGAAATCCTGTGTACATGATTGGGTCTCCTGATTATTATGGTACATGTAGGAAAAGCTGTAATGCATGCTGA 897 0.4203 MPSLSLFLTLLLLLSTASFSQSRKKLRNKHHESELRFSGHSVYYSNRVDPSRVVQISWQPRVFLYKGFLSDKECDYLISLAYAVKEKSSGNNGHSEDETSLDMEDDIVARIEERISVWTFLPKENSKPLQVMHYEPEQEGNNLDYFANKTKVELSGPLLATVVLYLSNASQGGQILFPESVPNSISWSNCRSSSKILQPAKGNALLFFSLHPSASPDKSSYHARCPVLKGDMWSAIKFFYARSISGGKLSTISDGGECTDEDDSCPAWAAMGECQRNPVYMIGSPDYYGTCRKSCNAC* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2632 298 SMART ShkT_1 257 298 IPR003582 -
Lja2g2632 298 Gene3D q2cbj1_9rhob like domain 44 240 - -
Lja2g2632 298 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 3 298 - -
Lja2g2632 298 SMART p4hc 60 240 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lja2g2632 298 ProSiteProfiles ShKT domain profile. 258 298 IPR003582 -
Lja2g2632 298 Pfam 2OG-Fe(II) oxygenase superfamily 130 240 IPR044862 -
Lja2g2632 298 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 3 298 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2632 Lja-Chr2 36294064 36297579 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2632 K00472 - gmx:100795761 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2632 2 36294064 36297579 Lja2g2632 2 36294064 36297579 ECH