Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2630 ATGTCAATTCTGTGTGGCATTCCTCTTGTTGAATGTGTATATTGTCTGGCTTGTGCTCGATGGGCTTGGAAAAGATGTCTTCACACTGCAGGCCATGACAGTGAGACTTGGGGCTTTGCAACATCAGAAGAATTTGAGCCTATCCCTCGCCTATGTCGCTATATTTTGTCTGTGTATGAAGATGATCTTCACCAACCTCTTTGGGCTCCTCCTTGTGGCTATGGAATTAACCCTGATTGGTTGATACACAAAAAGACATACAGAGATACCTCTGGGCGGGCTCCACCCTATATGCTGTATCTTGATCATGGTCATGCTGATATTGTCCTTGCCTTTAGGGGTCTAAATTTGGCAAAGGAGAGTGACTATGCAGTTTTATTGGACAATAGATTAGGGAAGAGAAAGTTTGATGGGGGGTATGTTCACAATGGGTTGTTGAAGGCTGCTGGATGGGTTTTGGATGCTGAATGTGAAGTCTTGAGGGAGTTGGTAGAGAAGCATCCGAACTACACTCTCACTTTTGTTGGTCATTCCCTTGGATCTGGTGTAGCGGCTATGTTGAGCATGGTGGTGGTGCAGAATAGTGATAGGCTGGGAAATATTGAGAGGAAGAGGGTCAGATGCTATGCCATTGCACCTGCTAGGTGCATGTCGCTGAATTTGGCAGTCAGATATGCAGATGTCATCAACTCCGTCGTGCTGCAGGATGACTTCTTACCAAGGACAGCCACTCCATTGGAAGATATATTCAAATCTCTTTTCTGTTTGCCATGCCTATTATGTTTGAGGTGCATGAGGGATACATGTATACCAGAGGAGAAGATGATTAGGGATCCAAGGAGACTCTATGCACCTGGTCGCCTTTATCACATTGTTGAGAGAAAACCTTTTAGAATGGGGAGGTTTCCCCCAGTTGTGAGGACAGCAGTGCCAGTCGATGGAAGGTTTGAGCATATAGTCCTTTCTTGTAATGCCACATCTGATCATGCCATCATTTGGATTGAGAAAGAAGCCCAGAGGGCTTTTGATTTGATGCTGGAGAAAGATCATACCATGGAAATCCCTGCAAAGCAAAAAATGGAGCGTCAGGAAACACTAACTAGACACAATCATGAATATAAAGCAGCGCTACAAAGGGCTGTAACATTAGATGTTCCACACGCTTATACACCACCATCACAGTATGGCACTTTTGATGAGGAAGGAGACGAGAGCTCAAAAAGATCACAGGGCGAGCCTTCTTTTGATTCAACTAATAGAAGCACAGTGGATGAAAGCTGGGATGAATTGATTGAGCGTCATTTTGATAAAGATGATGAGCATGGCAGCATGGTGCTGAAGAAAGAATGA 1350 0.4452 MSILCGIPLVECVYCLACARWAWKRCLHTAGHDSETWGFATSEEFEPIPRLCRYILSVYEDDLHQPLWAPPCGYGINPDWLIHKKTYRDTSGRAPPYMLYLDHGHADIVLAFRGLNLAKESDYAVLLDNRLGKRKFDGGYVHNGLLKAAGWVLDAECEVLRELVEKHPNYTLTFVGHSLGSGVAAMLSMVVVQNSDRLGNIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCLRCMRDTCIPEEKMIRDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRAFDLMLEKDHTMEIPAKQKMERQETLTRHNHEYKAALQRAVTLDVPHAYTPPSQYGTFDEEGDESSKRSQGEPSFDSTNRSTVDESWDELIERHFDKDDEHGSMVLKKE* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2630 449 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Lja2g2630 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 448 - -
Lja2g2630 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 448 - -
Lja2g2630 449 CDD Lipase_3 44 241 - -
Lja2g2630 449 Gene3D alpha/beta hydrolase 38 252 IPR029058 -
Lja2g2630 449 SUPERFAMILY alpha/beta-Hydrolases 41 270 IPR029058 -
Lja2g2630 449 MobiDBLite consensus disorder prediction 388 423 - -
Lja2g2630 449 Pfam Lipase 3 N-terminal region 9 70 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2630 Lja-Chr2 36280436 36285039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2630 1 448 Miscellaneous Gene Families AT3G49050 69.895 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2630 - - gmx:100796283 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2630 2 36280436 36285039 Lja5g0644 5 5790734 5795260 ECH
Lja2g2630 2 36280436 36285039 Lja2g2630 2 36280436 36285039 ECH