Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2613 ATGAAATCGTTGCCAAGATCCACCGTGATTCTGGTTTTTCCCGGCATCCTAATCGTTGGCGCGTTGCTGTACACGCGCTTCATCGACATGAATGAGGTCCTTCCAGCAGATTCATCTCCCAAACCAACACTAATTAGCAAGACAACACACGATGTACCAAACCAACTCCAAAAGCAAATAGAGATACCATTAAACTGTAGTGGATACAACAACCTCAGTAAAAGATGTCCTACAAACTACCCCTTCTCATGGAACAATCCAGACAAATCATTGAGCCCTACGTGTCCCGACTACTTCCGTTGGATCCACGAGGATTTACGGCCATGGGCCCAGACAGGCATAACGCAGAAGATGGTGGAGAAGGCAAAAGCAACAGCAAATTTCAAGTTGGTGATATTGAATGGAAAGGCTTATTTGGAGACGTATGAGAAGTCTTTCCAGACAAGGGATGTTTTCACACTGTGGGGGATTCTGCAATTGTTGAGAAAGTACCCTGGAATGGTGCCTGATTTGGAGCTCATGTTTGATTGTGTGGATTGGCCTGTGGTTTTAGCTGAAGGGCATAATGCTAGGGATCCACCACCGCTCTTTCGTTATTGTGGCAATGATGCCACATTGGATATTGTCTTCCCTGATTGGTCCTTTTGGGGATGGCCTGAGGTTAATATAAAGCCATGGGAAGTTTTATTGGGAGAGTTAAAAGAGGGCAACAAGAAGACAACATGGATGAACAGAGAGCCCCATGCTTACTGGAAAGGCAATCCCGCTGTTGCTGAAACTAGACAAGATCTCATGAAATGCAATGTTTCTGACAAACAAGATTGGAATGCTCGTTTATATGCCCAGGATTGGATTCGTGAATCACAAGAAGGGTACAAGAAATCAGACTTGGCAAGCCAATGCAATCACAGGTATAAGGTTTACATCGAAGGTTCTGCTTGGTCTGTCAGTGAAAAGTACATTCTGGCATGTGATTCTGTCACTTTAATTGTAAAACCCCATTACTATGACTTTTTCACAAGAGGGTTAATACCAGTGCACCACTACTGGCCCATCAAGGAAGATGATAAATGCAAGTCCATTAAGTTTGCAGTGGATTGGGGCAATAGTCACAAGGAAAAGGCACAGAAAATTGGAAAAGCGGCAAGTGATTTCATTCAAGATGAGTTGAAGATGGATTATGTGTATGACTACATGTTTCACCTCCTAAGTTCTTATGCTAAACTCTTTAGATATAAACCATCCATTAGTGCTCAAGCTATTGAGCTATGTGTCGAGTCAATGGTTTGTAATGCAGAAAGATTTGAAAAGAAATTTATGATGGAATCATTGGTCAAGGGTCCTAAAAACACCATGCCATGCACCATGCCTCCCCCTTATGATCCTCCATCCTTCAATGCACAATTAAGGAGAAAGGAAGGTACAATTCAACAAGTGGAATCATGGGAGAAACAAAATATGAAATCTTAA 1470 0.4245 MKSLPRSTVILVFPGILIVGALLYTRFIDMNEVLPADSSPKPTLISKTTHDVPNQLQKQIEIPLNCSGYNNLSKRCPTNYPFSWNNPDKSLSPTCPDYFRWIHEDLRPWAQTGITQKMVEKAKATANFKLVILNGKAYLETYEKSFQTRDVFTLWGILQLLRKYPGMVPDLELMFDCVDWPVVLAEGHNARDPPPLFRYCGNDATLDIVFPDWSFWGWPEVNIKPWEVLLGELKEGNKKTTWMNREPHAYWKGNPAVAETRQDLMKCNVSDKQDWNARLYAQDWIRESQEGYKKSDLASQCNHRYKVYIEGSAWSVSEKYILACDSVTLIVKPHYYDFFTRGLIPVHHYWPIKEDDKCKSIKFAVDWGNSHKEKAQKIGKAASDFIQDELKMDYVYDYMFHLLSSYAKLFRYKPSISAQAIELCVESMVCNAERFEKKFMMESLVKGPKNTMPCTMPPPYDPPSFNAQLRRKEGTIQQVESWEKQNMKS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2613 489 Pfam Glycosyl transferase family 90 92 483 IPR006598 -
Lja2g2613 489 SMART cap10 167 413 IPR006598 -
Lja2g2613 489 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 7 486 - -
Lja2g2613 489 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 7 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2613 Lja-Chr2 35676692 35685550 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2613 - - gmx:100800365 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2613 2 35676692 35685550 Lja2g2613 2 35676692 35685550 ECH