Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2611 ATGAGAGATAATTACAACATGACCATTGGACAAGAGCAGAAGAATTTCGGATCAGGGCATTTTCGTCATCACAAGGACGAAATCTGGCACACATTCATCAAATCATTGCCGAGATCTACTGTGATCCTGGTTTTCCCCGTCGTCCTAATCATCGGCGCGTTGTTGTACACGCGCTCCATCGACATGAATGAGGTCCTTCCCGCAGATTCATCTCCCAAACAAACATTATTTAGCACCACAACACACGACGTACCAAACCAATCCCAGAAGCAAATGGAGATACCACTAAATTGCAGTGGGTACAACAACATCACCAAAACATGTCCTGCATATAACCCCTTCTCATGGACCAATCAGGACCGTTCATCGAGCCCCATGTGTCCCGATTACTTCCGTTGGATCCACGAGGATCTACGACCGTGGGCCCAGACAGGCATAACAAAGGAGATGGTGGAGAAAGCAAGAGCAACAGCAAACTTCAAACTAGTAATATTGAATGGGAAGGCTTATTTGGAGTGGTATGAGAAGTCTTTTCAGACCAGGGATGTTTTCACTTTGTGGGGAATTTTGCAATTGTTGAGAAGGTATCCTGGAATGGTGCCTGATTTGGAGCTCATGTTTGATTGTGTGGATTGGCCTGTGGTTTCAGTTGATGGGGATAGTGCTAAGAACCCGCCACCAGTTTTTCGTTATTGTGGGAATGATGCCACGTTGGATATTGTCTTCCCTGATTGGTCCTTTTGGGGATGGCCTGAGGTTAATATAAAGCCATGGGGAGTTTTGTTGGGAGAGTTAAAAGAGGTCAACAAGAAGACAACATGGATGAACAGAGAGTCTCATGCTTACTGGAAAGGCAATCCCGCTGTTGCTGAAACTAGACAAGATCTCATGAAATGCAATGTTTCTGACAAACAAGATTGGAATGCTCGTTTATATGCCCAGGATTGGATTCGTGAAACACAACAAGGGTTCAAGCAATCAGACTTGGCAAGCCAATGCAATCATAGGTATAAGGTTTACATTGAAGGTTCTGCTTGGTCTGTCAGTGAAAAATACATTCTGGCATGTGATTCTGTCACTTTATTTGTAAAACCCCATTACTATGACTTTTTCACAAGAGGGTTAATACCAGTGCACCACTACTGGCCCATCAAGGAAGATGATAAATGCAAGTCCATTAAGTTTGCAGTGGATTGGGGAAATAGTCACAAGGAAAAGGCACAGAAAATTGGAAAAGCGGCAAGTGATTTCATTCAAGAAGAGTTGAAGATGGACTATGTGTATGACTACATGTTTCACCTCCTAAGTTCTTATGCTAAACTCTTTAGATACAAACCATCCATTAGTGCTCAAGCTATTGAGCTATGTGTGGAGTCAATGGTTTGTAATGCAGAAGGATTTGAAAAGAAATTTATGATGGAATCATTGGTCAAGGGTCCTAAAAACACCATGCCATGCACCTTGCCTCCCCCTTATGATCCTCCATCTATCAATGAACAATTAAGGAGAAAGGAAGGTACAATTCAACAAGTGGAATCATGGGAGACAAGATATTGGGAGAAACAAAATATGACATCTTAA 1581 0.4257 MRDNYNMTIGQEQKNFGSGHFRHHKDEIWHTFIKSLPRSTVILVFPVVLIIGALLYTRSIDMNEVLPADSSPKQTLFSTTTHDVPNQSQKQMEIPLNCSGYNNITKTCPAYNPFSWTNQDRSSSPMCPDYFRWIHEDLRPWAQTGITKEMVEKARATANFKLVILNGKAYLEWYEKSFQTRDVFTLWGILQLLRRYPGMVPDLELMFDCVDWPVVSVDGDSAKNPPPVFRYCGNDATLDIVFPDWSFWGWPEVNIKPWGVLLGELKEVNKKTTWMNRESHAYWKGNPAVAETRQDLMKCNVSDKQDWNARLYAQDWIRETQQGFKQSDLASQCNHRYKVYIEGSAWSVSEKYILACDSVTLFVKPHYYDFFTRGLIPVHHYWPIKEDDKCKSIKFAVDWGNSHKEKAQKIGKAASDFIQEELKMDYVYDYMFHLLSSYAKLFRYKPSISAQAIELCVESMVCNAEGFEKKFMMESLVKGPKNTMPCTLPPPYDPPSINEQLRRKEGTIQQVESWETRYWEKQNMTS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2611 526 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 36 524 - -
Lja2g2611 526 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 36 524 - -
Lja2g2611 526 Pfam Glycosyl transferase family 90 123 515 IPR006598 -
Lja2g2611 526 SMART cap10 199 445 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2611 Lja-Chr2 35590703 35597288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2611 - - gmx:100800365 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2611 2 35590703 35597288 Lja2g2611 2 35590703 35597288 ECH