Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2605 ATGTCTAATATGATAGAGGTCAGAGTTCCAAATCTTGATTGTGAGGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAACTCAAAGGAGTAGATGAAGTAGAGGTTGAAATGGAGGCACAAAAGATAACAGTGAGAGGCTATGGCCTAGAGGAGAAGAAGGTGCTGAAATCAATCAAACGCACAGGCAAAGCAGCAGAGCCATGGCCATTTCCAGGGCATGCTCATTTTACTTCATTTTACAAGTACCCAAGTTACATTGTTAACCAATATTACTATGATGCATACAAAACTGAAGCAACAAATGGAGTCCACACTTTCTTCCACACGCCTTCTGTCTATTCAGTTGCTGTGGCATCTGATGAGGCCTTTGCTTCACTCTTTAGTGATGATAACCCTCATGCTTGCACTATAATGTAA 420 0.4071 MSNMIEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMEAQKITVRGYGLEEKKVLKSIKRTGKAAEPWPFPGHAHFTSFYKYPSYIVNQYYYDAYKTEATNGVHTFFHTPSVYSVAVASDEAFASLFSDDNPHACTIM* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2605 139 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 31 3 139 - -
Lja2g2605 139 ProSiteProfiles Heavy-metal-associated domain profile. 4 68 IPR006121 GO:0046872
Lja2g2605 139 Pfam Heavy-metal-associated domain 7 64 IPR006121 GO:0046872
Lja2g2605 139 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 139 IPR045181 GO:0046872
Lja2g2605 139 CDD HMA 6 67 IPR006121 GO:0046872
Lja2g2605 139 SUPERFAMILY HMA, heavy metal-associated domain 4 70 IPR036163 GO:0046872
Lja2g2605 139 Gene3D - 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2605 Lja-Chr2 35438343 35439433 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2605 - - gmx:100802676 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2605 2 35438343 35439433 Lja2g2605 2 35438343 35439433 ECH