Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2601 ATGGACACCAAAGCAGTGCAGAGTCATGGCCATAACTACGATCAACATCATCAACCTCATAATGTTGGCTTACAACAAGGGGGGCATGGTATGGAAGAGCACAACCATGACCATGAGAAGAAGTCAGTTCTAAAGAAAGTCAAAGCAAAGGCTAAGAAAATTAAGGACACAATCACGAAGCATGGCCATCATGACCATGACCAGGAACATGGTCCTGAGTATCACCGTGAAGGTCACCATATCCCTGATGAACATGACTTGGATCAGGAAGATGATGAGGATGAGGAAATGGTGCAAGACCCAGAAATCCATGGAGCACCAATTTATGATAGTACTGCTGTTACAAGTGCCGCCAATAGGCCAGGGCAAGTTAAAACTTCAGAGAGGCCTAGAGTTAATTTTGGAGGTGCAAATGTTGTGGGGGAAAAACCTCATCATGAGCCAAGAGTTGTAGTTGTTTCCCCTTCCACTGAAATTAATCAAAGCAGATCCACTGGTCCAGCCAGAACATTTGTTGAGGCAGGGAGAGTAGAACAACCTAATGTCAATTTGGTGAGACCAATGGACTTGGAGGCAGATCCTCATGCCCCAGGAAATAGACATCCAGCATATGCTTCAGCCAATTATCAAACCAAAGTCACTGATCCAACTGGAGCAGGTGGTGCAGAGATCAACATTAACCCAGTTCAGAAATCCTTGGAAAGGATGACTATTCACAATGAGCCAAAACCTATCCCAGAACCAAAAATCCTTCCAACTATTGCTGAAACTCAGTCCCCTGCTGTTGGTGGCAACAAGCAATTTGTGCCAGGGTTATCTACTCCAACAAAAACTCATTACCCATCTGCTGAAACCCATGGCCAAAACTTACCAGAACTATCTGGTGAAATTAAAACTCACTACCCTAGAAGCCATGATCAAGTTATGCCAAATCCTATCTCACAACCAAAAATCCTTCCAACTCAGCATCCTTCTACTGGTGGGAGCCACCAGCAATTTATGCCAGAGGTATCTTCTATAACGAAAACTCATTACCCATCTGCTGAAAGTCATGGCCATATCTTACCTGGATTATCTAGTGAAATTACTAATCACTACCCTAAAAACCATGATGAAGTTATGCCAGATCTTACTCCTTCAATCAATACTCATGAACCTTACCCTTCTGCTATAAGACATGCCCAGAACCTAACAGGAGTGTCTAGTGCAACAAAAACCCATTACCCTTCTACTGGAAGCCATGATCAGTTTTCACCTGAGTTACCAATATCAAGTGAACCTAAACCTCAATACCCTTCTGCTAGAACTCATGACCAGTTCAATCCACAACATTCTAGTGCCACAGAAACTCATTACCCTTATGCTGGAAGCCATGGTCAGTTTGACTTACCAACTGAACATAAACCCCAACACCCTTCTTCTAGAATTAATGATCAATTCATGCCGTCACAACATGCTAGTGCAACATATACTCATTACCCTTCTGCTGGAAGCCATGGCCAATTTGCACCAGAGTTTTCTACTCAAATGAAAACAGGACAAACCGTGAACAACCCTACCCTCCCCAAAGTTGAAGAGCAACCTCAACCAATGGAGCAGCAATCAAACCAAACCAGTTACACAGACAAAATCTCCTCCGCAACCTCTGCCGTCACTAACACAGCAATAGGTGCCAAAAATGCCGTAGCTAACACAGCAATAGGTGCCAAAAATGCTGTCACTGGCACAGCTATAGGTGCTAAAAACGCCGTCGCAGCGACACTCGGGTACGGCGAAAAGGGTGGTGACAACACAGAGCAGAACGAATCGAGCCAGGGCAGTTACACAGAGAAAATCTCATCAGCAACATCAGCAATAGCCGACAAAGCCATCGGTGCTAAGAACACAGTAGCCTCCAAGCTAGGATTTGGCGAGAGCAGTGAAAGTGGCGAAAACGCTCTGAGAACACAGGAAGAAGAGAAAAACGAGGGGTTTTCTTCTACCACAGCGACAGGGTCTGCTGCTGAATATGGAAAGAGAATTGCTGAGTCTTTGACAGAGAAACTGGCTCCAGTTTATGGAAAGGTAACTGGAAGTGGAGTGAAGTCTGAGGTTTCTGAAAGTGGGGTTGTGGAACAGGATAAAGGGGTTTCTGTGAAGGACTATTTAGCTGAGAAGGTGAGGCCTGGAGAAGATGACAGGGCTCTGTCTGAGGTGATTTCAGAGACATTGCACATGAAGGGTGATGAAGAGGGTGGAGTTGTGGTGGAAGAGGAGAGGGATGTGAGAAGGGTGGTTTCTGATGCTGTGCATAAGAGAGGAGATGAGAGTGAGGGGAGAAGAAGAGTGCCATTGGGGAAGGTGACAGAGTCTGAAGAGGTGAAGAGAAGGTTGGGTGGTGAGGATAGGGAGACTGAGAGAAGGTATGAAGAGAGCTATGTGAATAGCCCTGGAGAGGGTGTGGTTGATAAGGTTAAGGGGATGGTTGGATCATGGTTTACAAAACCTGTGGATAATCAATCATCATCACAAGGAGATGAAGTTCTGTCTAGGAAATCTGGAGCAGAAGACAAACAGTTTAACCAAGCTACAGGTGAAAGAAGATTCCAGGGGTCGTCTAATTGA 2604 0.4516 MDTKAVQSHGHNYDQHHQPHNVGLQQGGHGMEEHNHDHEKKSVLKKVKAKAKKIKDTITKHGHHDHDQEHGPEYHREGHHIPDEHDLDQEDDEDEEMVQDPEIHGAPIYDSTAVTSAANRPGQVKTSERPRVNFGGANVVGEKPHHEPRVVVVSPSTEINQSRSTGPARTFVEAGRVEQPNVNLVRPMDLEADPHAPGNRHPAYASANYQTKVTDPTGAGGAEININPVQKSLERMTIHNEPKPIPEPKILPTIAETQSPAVGGNKQFVPGLSTPTKTHYPSAETHGQNLPELSGEIKTHYPRSHDQVMPNPISQPKILPTQHPSTGGSHQQFMPEVSSITKTHYPSAESHGHILPGLSSEITNHYPKNHDEVMPDLTPSINTHEPYPSAIRHAQNLTGVSSATKTHYPSTGSHDQFSPELPISSEPKPQYPSARTHDQFNPQHSSATETHYPYAGSHGQFDLPTEHKPQHPSSRINDQFMPSQHASATYTHYPSAGSHGQFAPEFSTQMKTGQTVNNPTLPKVEEQPQPMEQQSNQTSYTDKISSATSAVTNTAIGAKNAVANTAIGAKNAVTGTAIGAKNAVAATLGYGEKGGDNTEQNESSQGSYTEKISSATSAIADKAIGAKNTVASKLGFGESSESGENALRTQEEEKNEGFSSTTATGSAAEYGKRIAESLTEKLAPVYGKVTGSGVKSEVSESGVVEQDKGVSVKDYLAEKVRPGEDDRALSEVISETLHMKGDEEGGVVVEEERDVRRVVSDAVHKRGDESEGRRRVPLGKVTESEEVKRRLGGEDRETERRYEESYVNSPGEGVVDKVKGMVGSWFTKPVDNQSSSQGDEVLSRKSGAEDKQFNQATGERRFQGSSN* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2601 867 MobiDBLite consensus disorder prediction 827 867 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 1 16 - -
Lja2g2601 867 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 483 563 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 760 806 - -
Lja2g2601 867 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 483 563 IPR037491 GO:0009737
Lja2g2601 867 MobiDBLite consensus disorder prediction 347 386 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 635 667 - -
Lja2g2601 867 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 598 848 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 429 453 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 760 814 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 58 86 - -
Lja2g2601 867 Pfam CAP160 repeat 612 637 IPR012418 -
Lja2g2601 867 MobiDBLite consensus disorder prediction 402 420 - -
Lja2g2601 867 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 454 IPR037491 GO:0009737
Lja2g2601 867 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 598 848 IPR037491 GO:0009737
Lja2g2601 867 MobiDBLite consensus disorder prediction 402 479 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 512 541 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 30 44 - -
Lja2g2601 867 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 454 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 1 93 - -
Lja2g2601 867 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2601 Lja-Chr2 35344774 35348217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2601 - - lja:Lj0g3v0202659.1 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2601 2 35344774 35348217 Lja2g2601 2 35344774 35348217 ECH