LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g2597	ATGCGAACTCGCTTTCTCAACAACGATTACTTCACCCTCCCTCCTCCGTCTCACCGCCACCACGAAACCCTCCCCTTCCTCCACCTCCCTGTCCCTCGCCTCTCCACGCCGCCTCCCTCCTCCGTCCACAACCACCTCCGCTTCCATCCCCCTCTCCGCCTCTCACTCCTCACCGACCCCTTGCCGATCGACGCCGCACTCTCCACCTTCCTCTCCGATGTCCTCCCTCACCGAATCCACCTCGAATCGTACAACCTCTCAGTTCCGGACCTAGACACGAATCGCGAGCATCAAGCAGAGGTTATCTTTGAAGATCATCTCCCTGAAGCTGATATTGAATTTCTGAAAGAGAGTGCAACGATTGCTCGAAGTGATAAGAGCGATACTGTTCGCGAACCTATTCAATTCGAAACACCTGAGCTAGACACACTCTTGGAAAATGAATGCTTCACTGAGAACGAGAGGATGCAAATGCTGTCTCAAACTCCTGACGTTGAAAATAGCCTGGAAATGGTCAAGCCTGAGGTATTATGGCAGTACCCTTATGAGGCTCTGGAATCAGTATCTAAGGTTGAAGATGTTGTTTCGGAGTACCTGAAAGGGGAGAAAGAATATTCTTTAGAAGATAATATCTCTATGCAGCACCTTCCACACATTGAACAAAACATATTTCTTGTTCTGGAAGTGGATGAGGAAAGTTTGGGAATTCCCTCGTGCTTATCTATGGTAGAAATTGTTGATTCATATTTTGAAAATATCAGACCTCAAAATTTTGATGAACGATATCAATCAGTTACAGAGGGCAAGGAGCTTTTGGGTTCTGAGGAGCAAAACATGATGAAGTTTTTCTCAGATGACTGTGTATCAAAAAAGAGCTTGGTGTTATCCGATTTGTCCCCTGACAATGATTTTATAAACATGTTGGAAACTGAACATGTTGATTGGAATATTGCCCTGCAAGGAAAAGGGCAGGTCGATAGTGCTTTGTTAGCAAATCTCGTTACCTTCCAGGAATACATCTTCCTTGATGAGGACTTAATTCAAACCCTTGATGCTTTCTATGACACGAAAGCATCGGTTGATCAAGAAAGAAGTGACCAGATGTTCATGAAAGAATTTAACTTCAAGAGTTTTGATGAATTGGTTGTTAGTAATGAGATGGCTCTAATAGATGACCGGTTCAAATCACTGCCTGTACCTGTTATCTCTGATTATGAAAAGTTGATAACTCCACATGATATCATTGGAGAACTATTTTCCAACATGAAGACGCGGCCTCTATCTGCATCTGATGGCATTTACTTAAACTGGGATCTACTTGATGAAGATAAATGCAATTACAAAATGTCTAATTGGTATCTGAACATATGCGCCAAGATAGATCTGAAAAACCAAGACATTGCGGGAAATTCTTTTGACAACAGAAATGTGGTTTTTGATCTAGTTTTCTGTTGTGATATAGGTGAATGCGACATTGTACAAAGTGTAGAGTTGAAGAAGTTGCTTTCTGATTGCATTCCTCTGCCTGACAATCTGCCTGAAGAATTTACTTCAAGCAATCTATTACAACATGGATCTTCTAAACAAGGATGTCGAGAGCAATTACCGTGTCGAGAGCAATTACCAGAAAGGGATGCAGAGAGGGCTTCATTATTTTTTAAGTCTATGTCAGAAATCAGCAATCTTGAGTATTTCTTAAACCCTAAATATGTGACTGATAAGGCGAACTGTAATTTTGCAGTAGAGTCCACCAATGCTAATGTTAATATTCCAAAAGATACATCCACCGAATTTAAGGCTGGTCTACAGTCACACGGATGGCACACTGTTTTGCATAGAATTAAGTTGTCCGACAATATTGTGGCCATTACAGCATATTTTGAAAAATGCTATCTAGCCATTTTGCAGAGTGATACAGAGCTGACAAAGATGTATAACCCAGATGTAGATTATTTTAAATTACTGAGCTTTCCAAAGCGCAAGCTGTTTGAATACCATGTGAATGGAAACAATATGGCGTTTATTGCGCTAAGTGCAATTAAACAGGCTGCTTGGTACTTAAGTTTTTATGGTCTCAATCCAGCATGCTTGTATGTAGACAAATTATGTCAAAACTTGGATTACTTGAAATCAAGGTTAGGCTTCCTCCAATCTTTGATCAAATATGAAAACAGAAAGGTGGACGGCAGTTATACCATAGCACATCCATCACTAACAATTGTCAAGGAAATTTTACAGTCAAGCATCAAAAGTAATAGTTTGAAAGCTCTAATTGTGGCTGAAGAAGTATTCTGGTGGTCATTGAAAAATCTCCTTCTTTCCTTGGGGTTATCGTGCAGTAAACTAAATGATTCTTACAGAAATCAGCCCTATGCGAGTAATCTGCCTGAGGACACAAATACTAAAATGAAGGAACTTCTGAATTCAGACTGCTTGCTGGTTTCACATAAGCATGTTTCTCTGTTGTTTCCATTCAACAAATTTGGCATTATCCTGGAATATGGTGGTCCATATGGCTCATCTAGAATATCTGAACTTTCTCCAAACTCGGTTGGAAAGCCTCATCTTCACTTTTTGACGATTGATTTGGATGACCATGCTGCTTCCAAAGCACTGTGTGAGGGCGTTGAAACCCCCCCAAACACTGGAATGTTACTGGAAAGTGAGACTCCCCTTATTTTCTATCACAAAGAAAGTATGGCAAATCAGAAGTTAGAGAGACTGCTGAACTTTTGTCCAGTGGAACAAAGCTATGGTATAGAATCTTCAAAGGTTGCACCTGAAACAGACAATTTTGTGCCAGTAATTACTGCAGCGCAATCTGAGCATGGAAATCAGAGTTTGGAGCCTTTTTCTGGATCAGTTATCATCGTGAATACTCAAAACATAGATAAGGAGATGATAGTGTCTAGAAGAAGCTCTTACCAAGTAATTCTTGCAATGGAGAAAGGAGGAGTTCAAGTTGTTGAACGTGATTTAGATTTGCCGGTGGATATTATAATAAGTTCTGGAATTTGCTTGGCATGGTATGATAGCAGAAACCTGGGGAAGAAAGGAACTCCAGCTACTGAAGCATCTTCAAGTTTGCCTCTATGTATTGACAATATTGCAACAGATGTTCTGACATTGCTTAGTTTTTACTTCCGTGGCTGCTTTCTGGTCTTTGAGGGAGAATTTGACTTTCTTTCAATTGTAATGGAGTCCTCAGATGGACTTTATGCTGCAGCAGCAAGCCTGGGAATTGATTTGCAGATCTTCTTCTCTTACTCTCCTGAGTTGTCAAATGAAGTTATCCTAAGCTGCATTAAGAATGCTGCCAAATTGACAAGGGGTCTGTATCCTAAAATGCCCGATTCTGTAACTCTAGCAGAGTCATTTCTTACGCAATTTCCTGGAATAAATCCTTTAACAGCACACTCTATACTATCTTCAGGGGCTATGCTTAATGAGTTTCTTGAGTGTTCACATGAACAAAGGATGCGTGTTTTAGAAAACTATGACGTTCCAGAAGAAAGTCTTTCTCTATTTAGTGTTTTCTGCAAATATGGGGAACGGGAGGATTCAAAATCCATAATGACAGACTGCTCGTCCTCAGTATCTTCTGGTCCAGACTCAGATAGGTGCCATCGATATCAAGTTGACAACAAAAGAAAAAGAAAAAACCCTATAAGTAGTCATCAGAAAGATGAACAATACTTTGATGAGTTGTTGCAATTCAAGACATTAAACCAAGAAGTTGAGGCTATCCCAGATTCCTCTACTTTGCCAAAACCTTTTGATCTTGGAATGTCAAAAGCTGCTGGGAGATCCAGTGACTTGGAAAAGGCTAGTTTGTGCATGAGTGATTTTTTCGATCAGAAGCAACCAATCACTGCGAGTACAATGAGAAACCCTTCCAGAGTCTACCCATCTTCACGGAACAGCAAAGCTCCCCGAATATCAGAGCAGGTGGAACAGCCATGTTTATCTTTCAAAAATAATGAGTTGGTTCAAAATGAAATACTGGATATTGACTTGATGGGGAAAAGCATGAATTGGAATAGCCTTAGTAGTTCTGAGAAGCTGCATGAGGACATTAGAGGTGAGGTGGTTGACTTGACTGATAGTCCCCTATTAGATGAAAGCTTCCCCATGTCTGACTTCATGTACTTCCCAAATTTGGTGACTGATACAGAGAAGGATCAGCTAAGAAAGAGCAAAATTGCAAGAAGATTGTCATTTAATAATAGAAGTCACCCTGCAACCAACTCATCGGAAATATGGAAATCTTTACAAGATACAGCTAGAGAAGTTGACGACTATCCCGAACCAGATTTTGGAAAAGATGTATTTCCTCTTGATTTCAAGCCTCCTGAAAACGTTGGCTTAACTCAGGTAGCTATGACAAACTTACAAGGATTACACTTTCAGGACAGAATGTCACATTTGAGCGAGACTCCACTCTCCCGTGCCCGCCGGTCAGCTAGTCCATTGAGGCATTCACCTTGGACTATTGACTTTCTCAATAAAGTAAAAGAAAAGAGCAAACTGCGTCAAAAATCGTTATCATATCAGAAGTCTCGCCCTTGCTTTGGGTACCAGGGGAATGTGTCGAAAGTTCCTAAGAGAAGAAGTCCTTCTATAATTGAGTTCTTTAAGTATCAACCTGGAAGAACACCTGGAAATTTTCCGGAACAGAAAAGACAGAAGCAATCTGGACAATCTTCAAACTCTGTCAAGAAAGGAAGATATTCCACTTGCGTACCTTCATGGACTCCTGATGACAAGAGATCAACCAAGGCACTGACTTTTGGGAAGAAAGAAAGTGGAAGCCAAACTAAGCTGGTCTGGAGTGACAAACAGAGGTTCCAGTATCAGACGCAATAA	4866	0.4077	MRTRFLNNDYFTLPPPSHRHHETLPFLHLPVPRLSTPPPSSVHNHLRFHPPLRLSLLTDPLPIDAALSTFLSDVLPHRIHLESYNLSVPDLDTNREHQAEVIFEDHLPEADIEFLKESATIARSDKSDTVREPIQFETPELDTLLENECFTENERMQMLSQTPDVENSLEMVKPEVLWQYPYEALESVSKVEDVVSEYLKGEKEYSLEDNISMQHLPHIEQNIFLVLEVDEESLGIPSCLSMVEIVDSYFENIRPQNFDERYQSVTEGKELLGSEEQNMMKFFSDDCVSKKSLVLSDLSPDNDFINMLETEHVDWNIALQGKGQVDSALLANLVTFQEYIFLDEDLIQTLDAFYDTKASVDQERSDQMFMKEFNFKSFDELVVSNEMALIDDRFKSLPVPVISDYEKLITPHDIIGELFSNMKTRPLSASDGIYLNWDLLDEDKCNYKMSNWYLNICAKIDLKNQDIAGNSFDNRNVVFDLVFCCDIGECDIVQSVELKKLLSDCIPLPDNLPEEFTSSNLLQHGSSKQGCREQLPCREQLPERDAERASLFFKSMSEISNLEYFLNPKYVTDKANCNFAVESTNANVNIPKDTSTEFKAGLQSHGWHTVLHRIKLSDNIVAITAYFEKCYLAILQSDTELTKMYNPDVDYFKLLSFPKRKLFEYHVNGNNMAFIALSAIKQAAWYLSFYGLNPACLYVDKLCQNLDYLKSRLGFLQSLIKYENRKVDGSYTIAHPSLTIVKEILQSSIKSNSLKALIVAEEVFWWSLKNLLLSLGLSCSKLNDSYRNQPYASNLPEDTNTKMKELLNSDCLLVSHKHVSLLFPFNKFGIILEYGGPYGSSRISELSPNSVGKPHLHFLTIDLDDHAASKALCEGVETPPNTGMLLESETPLIFYHKESMANQKLERLLNFCPVEQSYGIESSKVAPETDNFVPVITAAQSEHGNQSLEPFSGSVIIVNTQNIDKEMIVSRRSSYQVILAMEKGGVQVVERDLDLPVDIIISSGICLAWYDSRNLGKKGTPATEASSSLPLCIDNIATDVLTLLSFYFRGCFLVFEGEFDFLSIVMESSDGLYAAAASLGIDLQIFFSYSPELSNEVILSCIKNAAKLTRGLYPKMPDSVTLAESFLTQFPGINPLTAHSILSSGAMLNEFLECSHEQRMRVLENYDVPEESLSLFSVFCKYGEREDSKSIMTDCSSSVSSGPDSDRCHRYQVDNKRKRKNPISSHQKDEQYFDELLQFKTLNQEVEAIPDSSTLPKPFDLGMSKAAGRSSDLEKASLCMSDFFDQKQPITASTMRNPSRVYPSSRNSKAPRISEQVEQPCLSFKNNELVQNEILDIDLMGKSMNWNSLSSSEKLHEDIRGEVVDLTDSPLLDESFPMSDFMYFPNLVTDTEKDQLRKSKIARRLSFNNRSHPATNSSEIWKSLQDTAREVDDYPEPDFGKDVFPLDFKPPENVGLTQVAMTNLQGLHFQDRMSHLSETPLSRARRSASPLRHSPWTIDFLNKVKEKSKLRQKSLSYQKSRPCFGYQGNVSKVPKRRSPSIIEFFKYQPGRTPGNFPEQKRQKQSGQSSNSVKKGRYSTCVPSWTPDDKRSTKALTFGKKESGSQTKLVWSDKQRFQYQTQ*	1622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g2597	1621	MobiDBLite	consensus disorder prediction	1192	1227	-	-
	Lja2g2597	1621	PANTHER	PROTEIN SHORTAGE IN CHIASMATA 1	1	1615	-	-
	Lja2g2597	1621	MobiDBLite	consensus disorder prediction	1547	1605	-	-
	Lja2g2597	1621	MobiDBLite	consensus disorder prediction	1207	1227	-	-
	Lja2g2597	1621	PANTHER	PROTEIN SHORTAGE IN CHIASMATA 1	1	1615	IPR038824	GO:0007131
	Lja2g2597	1621	MobiDBLite	consensus disorder prediction	1555	1590	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g2597	-		-	lja:Lj0g3v0198769.1	2332.75

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja2g2597	2	35287868	35297954	Lja2g2597	2	35287868	35297954	ECH