Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2571 ATGTCACGGAGAGATCTAGAAGGTGGCAGAGGAAGCAAGAGAGCAGCATCAAATGCTTATGATCCAGAAACCCATTGGACATCATGGCTTGTGCCTCTGTTTGTGGCGGTCAATGTTGTTCTTTTCATTGCCGCCATGTATGTTAACAATTGTCCTCGTAAGAATCCTGGCTTTGATGGTGACTGTGTCGCCAGGTTCCTGGGTAGATTCTCCTTTCAGCCTCTCCGGGAGAATCCACTGTTTGGACCTTCTTCTGCGACGTTAACAAAGATGGGAGCTCTTAAGTGGGACGATGTTGTGAATCGTCACCAGGGATGGAGACTTTTCACATGTATTTGGTTACATGCTGGAATTATTCATTTGGCAGCAAATATGTTGAGTCTGGTTTTCATTGGCATTCGCCTTGAACAACAATTTGGGTTTGTGAGGATAGGAATCATTTACCTGTTGTCCGGATTCGGTGGGAGTGTATTGTCATCTCTATTTATTAGAAACAACATCTCCGTTGGTGCTTCTAGTGCTTTGTTTGGACTTCTTGGAGCAATGCTCTCAGAACTTATCACAAACTGGAGTATTTACTCCAATAAAGCAGCTGCTTTGCTCACACTAGTCCTTATTATTGCTGTCAATCTTGCCATTGGCATGTTGCCACATGTTGATAATTTTGCTCATATAGGAGGATTCCTAGCAGGATTTCTTCTTGGTTTTATTTTCCTACCCCGTCCTCAATTCGGGTGGTCAGAGCAGCAACATCTTCCTACTGGTGTTCGTGTAAAATCAAAGTACAAGGCTTACCAATATGTTCTATGGATTGTCTCTGCTGTTCTATTCATCGCTGGGTTATCCATTGCTTTAGTGATGCTGTTTCGCGGTGAGAATGGATATGATCACTGCCATTGGTGTCACTACCTAACGTGTGTACCTACTTCTAAATGGAAATGCGATGACAGTTAA 954 0.4329 MSRRDLEGGRGSKRAASNAYDPETHWTSWLVPLFVAVNVVLFIAAMYVNNCPRKNPGFDGDCVARFLGRFSFQPLRENPLFGPSSATLTKMGALKWDDVVNRHQGWRLFTCIWLHAGIIHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASSALFGLLGAMLSELITNWSIYSNKAAALLTLVLIIAVNLAIGMLPHVDNFAHIGGFLAGFLLGFIFLPRPQFGWSEQQHLPTGVRVKSKYKAYQYVLWIVSAVLFIAGLSIALVMLFRGENGYDHCHWCHYLTCVPTSKWKCDDS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2571 317 Gene3D - 24 241 IPR035952 -
Lja2g2571 317 SUPERFAMILY Rhomboid-like 26 243 IPR035952 -
Lja2g2571 317 PANTHER RHOMBOID-LIKE PROTEIN 3 1 316 - -
Lja2g2571 317 Pfam Rhomboid family 100 242 IPR022764 GO:0004252|GO:0016021
Lja2g2571 317 PANTHER RHOMBOID-RELATED 1 316 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2571 Lja-Chr2 34651458 34654240 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2571 - - gmx:100813345 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2571 2 34651458 34654240 Lja2g2571 2 34651458 34654240 ECH