Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2568 ATGGCCGGCGGCGATTCCACCGCCGTACCCTACAACCCCACCTTCAAACCCTCTAAACCCAACCCTCTCTTCAAAAAATCCAACCTCTACCCCCTCATCGCCGTCCTCTGCATCATCTCCTACCTCCTCGGCGCATACCAACAAAACCCCACCACCACAACCACCGCCACCGCCGTCACCACCACATGCGCCGAAAACCCAACCAAAACATCCACTACTAAACTAGACTTCCACTCCCACCACAATGCCACCACCGCCACCTCCACCCACAAGCGCCGCTACCCACCGTGCAACGCTGCTCTTAGCGACTACACACCCTGCGAGGACCGCGCGCGTTCCCTCCGGTTCCCGCGTGACAAGATGGTGTACCGCGAGCGGCACTGCCCTGGGAAGAAGGAGCTTCTCAAGTGCCGTGTCCCCGCGCCGCACGGTTACCGGAGCCCATTCCCCTGGCCGGCGAGCAGGGACATGGCGTGGTATGCTAACGTGCCGTACCGCCATCTCACGGTGGAAAAGGCGGTTCAGAACTGGATCCGTTACGACGGCGATAGGTTCCGGTTTCCCGGCGGCGGAACCATGTTCCCCGACGGCGCTGATAAGTACATCGATGATATCGGCGCGCTCATCAACCTCAGGGACGGTTCGGTTCGGACTGCGGTGGATACTGGTTGCGGGGTTGCTAGTTGGGGAGCCTATCTTCTATCCCGTGACATATTAACAGTGTCAATTGCACCAAGGGACACCCACGAAGCACAGGTTCAGTTTGCTCTTGAACGAGGAGTTCCTGCTCTCATTGGAGTACTTGCCTCTAAGAGGTTGCCTTTTCCTTCCAGAGCCTTTGACATGGCACACTGTTCTCGCTGCCTCATTCCTTGGGCTGAATATGATGGGCTTTATCTAAATGAAATTAATCGAATTTTACGCCCTGGTGGGTACTGGATCCTATCGGGTCCACCAATCCGGTGGAAGAAATATTGGGAAGGATGGGAAAGAACAAAGGAGGATCTGAATGAAGAGCAAACCAACATTGAGAAGGTAGCTGAAAGCCTATGTTGGAAGAAGCTAGTGGAGAAGGGTGACATTGCAATTTGGCAGAAAGCTCAAAACCATTTAGATTGCAAAGCCAACAGACCTATCTGCCAGGCAGAGAATAACCCTGACAAAGCATGGTACACAGATATGCAAACATGTTTGAGTCCTCTGCCTGAAGTGTCCAGCAAAGAAGAAACTGCTGGTGGGGCATTGGAAAATTGGCCTGACAGAGTAAAAGCCACCCCACCAAGGATTTTCATGGGGGTCATAAAGGGGGTTACTTCTGAAACTTTCTCAGAAGACAATGAGCTTTGGAAGAAAAGGGTATCATATTACAAGAAGGTTAACAATCAGCTAGGAAAACCTGGGAGATACCGCAACTTTTTAGACATGAATGCCAACTTGGGTGGATTTGCTGCAGCATTCATTAAGTACCCTGTTTGGGTTATGAATGTGGTTCCTGTCCAGGCTAAGGTTGATACACTAGGAGCTGTGTTTGAAAGGGGATTGATTGGAATATACCATAATTGGTGTGAAGCAATGTCTACTTATCCTAGAACTTACGACTTAATTCATGGTGATTCGATTTTCAGCCTTTACAATGACAGATGTGAATTAGAGGACATTTTGCTAGAAATGGATAGGGTTCTTAGACCTGAAGGAAGTGTGATAATCCGAGATGATGTTGATATATTGATAAAAGTGAAGAGCATAGTCAATGGCATGGACTGGGAAAGTCAAATTGTGGACCATGAAGATGGACCTCTTGAAAGGGAGAAGCTTTTATTTGCTGTGAAGAAGTATTGGACATCCCCTGCATCTTCTGACAAGAGTAGTTAA 1872 0.4963 MAGGDSTAVPYNPTFKPSKPNPLFKKSNLYPLIAVLCIISYLLGAYQQNPTTTTTATAVTTTCAENPTKTSTTKLDFHSHHNATTATSTHKRRYPPCNAALSDYTPCEDRARSLRFPRDKMVYRERHCPGKKELLKCRVPAPHGYRSPFPWPASRDMAWYANVPYRHLTVEKAVQNWIRYDGDRFRFPGGGTMFPDGADKYIDDIGALINLRDGSVRTAVDTGCGVASWGAYLLSRDILTVSIAPRDTHEAQVQFALERGVPALIGVLASKRLPFPSRAFDMAHCSRCLIPWAEYDGLYLNEINRILRPGGYWILSGPPIRWKKYWEGWERTKEDLNEEQTNIEKVAESLCWKKLVEKGDIAIWQKAQNHLDCKANRPICQAENNPDKAWYTDMQTCLSPLPEVSSKEETAGGALENWPDRVKATPPRIFMGVIKGVTSETFSEDNELWKKRVSYYKKVNNQLGKPGRYRNFLDMNANLGGFAAAFIKYPVWVMNVVPVQAKVDTLGAVFERGLIGIYHNWCEAMSTYPRTYDLIHGDSIFSLYNDRCELEDILLEMDRVLRPEGSVIIRDDVDILIKVKSIVNGMDWESQIVDHEDGPLEREKLLFAVKKYWTSPASSDKSS* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2568 623 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 103 610 IPR004159 GO:0008168
Lja2g2568 623 PANTHER METHYLTRANSFERASE PMT15-RELATED 22 618 - -
Lja2g2568 623 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 456 573 IPR029063 -
Lja2g2568 623 Gene3D Vaccinia Virus protein VP39 198 378 IPR029063 -
Lja2g2568 623 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 22 618 IPR004159 GO:0008168
Lja2g2568 623 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 329 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2568 Lja-Chr2 34612379 34619273 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2568 - - gmx:100814235 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2568 2 34612379 34619273 Lja2g2568 2 34612379 34619273 ECH