Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2555 ATGGGGGCTGGTATTTCTTCAACTGCATCAGAAAATGATGATTGTTGGGGCTCTCTTTCTCTGCCATCAAAGACTGGTCTTGATGATGTGCCAGAAAACTGCATCTCTTCCCTGCTGATGAGTCTTGATCCACAAGAGATTTGTAAGTTGGCCAGAGTCAACAAAGCTTTTCATAGAGCTTCCTCTGCTGACTTTCTTTGGGAATCAAAGTTGCCCCCAGGCTACAAATTTCTTGTTAATAAAGTTTTGGGGGAAGAAAAACTTGGTTCCATGACCAAGAAAGAGATCTATGCCAAACTATGCCAACCCAATTTCTTTGACGGTGGTGCCAAAGAAATTTGGCTGGACAGATGCAGTGCACAAGTTTGTTTGCTCATTTCACCAAGGTCTTTGAAGATAACAGGAATAGATGATAGAAGATACTGGAATTATATTCCGACTGAGGAATCAAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTACTAGGGGAGCTAGATTTTGAATTTCCCAAAGGGAACTATAGCATATATTTCAGGCTCCAATTGGGGAAAACTTCTAAGAGATTGGGGCGGCGCGTGTGCAACCTTGACCAGGTTCATGGCTGGGACATCAAGCCCGTTAGATTTCAGCTATCTACATCCGACGGCCAGAGTTCATTGTCCCAGTCTTATTTGCGTGGGCCTGGAGAATGGGCTTTCTACCATGTTGGAGACTTTGCCATTGAGAGGCCCAATGTGTCCACAAACATCAAGTTTTCTTTGGCTCAAATTGATTGCACTCACACCAAAGGTGGTCTCTGCATTGATGGGGCAGTGATTTGTCCAACAGGGTCAATTGACAAATTGAAACAATTTTAG 873 0.4353 MGAGISSTASENDDCWGSLSLPSKTGLDDVPENCISSLLMSLDPQEICKLARVNKAFHRASSADFLWESKLPPGYKFLVNKVLGEEKLGSMTKKEIYAKLCQPNFFDGGAKEIWLDRCSAQVCLLISPRSLKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVLGELDFEFPKGNYSIYFRLQLGKTSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQSSLSQSYLRGPGEWAFYHVGDFAIERPNVSTNIKFSLAQIDCTHTKGGLCIDGAVICPTGSIDKLKQF* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2555 290 Pfam Phloem protein 2 122 280 IPR025886 -
Lja2g2555 290 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Lja2g2555 290 PANTHER F-BOX PROTEIN 1 290 - -
Lja2g2555 290 SUPERFAMILY F-box domain 22 86 IPR036047 GO:0005515
Lja2g2555 290 ProSiteProfiles F-box domain profile. 24 70 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2555 Lja-Chr2 33996238 33999542 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2555 - - gmx:100787859 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2555 2 33996238 33999542 Lja2g2555 2 33996238 33999542 ECH