Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2554 ATGTCTGAAGTGAAAAACAATGTGGATTTCATCCAATTGCTTGAACCTGACATGTCAATAAAGATTCTAAACCATTTGGATGATCCTTGTGACCTTGTTCGTGTTTCTATTGTTTCCAGTTCTTGGCACAGATTTGTTATTGAAAATGGCCTTTGCAAGCGACTTTGCTTAAGAATGTTTCCTGAAATATCTCATGTTGCTCATAGCATTGAGCTAGGAAACATGATTGAACCAGTATGTAACGTGCTTGACAATTGGGAGTGTCTTAAGAGAAATCATAAAGTGTACGCATTCCTGGCTTCTGGTCTGACTCCTACTTGGAAAAATTGCATCTCAGAAGCAATTAGTGCATCCAGCACTGATAACTACCCTGAAGAAAGCATTCAGAATACTTTGGAGCCTAGGGATAGAACTGAAAATAGATTATTATACTGGTCAAGTAAAGGAGAAAGCGATCCATCTGTTCCTGAGACTTTAGGTTATCAGCTTATTTCCAAACTATGTCTTGTTACAGAAATTCATGTCCAACCATTCCAAGCGTATTTTCAGCATGGCTTCCCTATATATTCAGCTAAGGCTGTCCGGTTCAGAATGGGCCATCCAAGATACCCAATGGAATTAGAGAGTTTAGTAGCTGATGATATGGCTGCTAACCGCATGCTAGGGGATAGCCAATTCATATGGACATATACTTCACCTGAATTTCCAATGTTTCAGGAAAACCGCTTGCAAAAATTCAAGCTACCTGAACCTGTCCTGTCAATTGGAGGTGTGCTGCTTGTTGAGCTATTGGGAAGAGTTCAAAAACAAGAAATGGATGAATTGTTCTACATATGCATCTCCCATGTTCAAGTTGTGGGGCAGCCGCTTTCACCCGCATTTGATATTAAAATTCATCACCCATCAGGAAAGTGTACCCTGAAATACTTCCCTCAAACCGATTGGTGTGTGCCTTCAACATCATCACCGACAATAGAGTCAAACAATCCTTCGCGCCTGCGGTCATTAATGCAGAGTGGTGTTAGACGTTGGGAGCAGATTATCTTGGGTGCACTGCTTGGTTCTGGATCTGTTGCAGTTGATGATTAA 1089 0.4105 MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMFPEISHVAHSIELGNMIEPVCNVLDNWECLKRNHKVYAFLASGLTPTWKNCISEAISASSTDNYPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLGYQLISKLCLVTEIHVQPFQAYFQHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPMFQENRLQKFKLPEPVLSIGGVLLVELLGRVQKQEMDELFYICISHVQVVGQPLSPAFDIKIHHPSGKCTLKYFPQTDWCVPSTSSPTIESNNPSRLRSLMQSGVRRWEQIILGALLGSGSVAVDD* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2554 362 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 5 356 - -
Lja2g2554 362 Gene3D - 1 120 - -
Lja2g2554 362 SUPERFAMILY F-box domain 6 71 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2554 Lja-Chr2 33966818 33973426 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2554 - - gmx:100786763 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2554 2 33966818 33973426 Lja2g2554 2 33966818 33973426 ECH